Frontiers in Plant Science | Plant Bioinformatics

Original Research

Accepted on 28 Apr 2025

Genome-Wide Transcriptome Analysis Reveal the Molecular Mechanism for Triggering the Formation of Purple leaves in Rice Mutants nip-lpl and nip-dpl

in Plant Bioinformatics

Chengyu Wang
Yujie Zhou
Hongyu Zhao
Xinyu Chen
Weifang Liang
Han ZHENG
Haipeng Zhang
Fan Hou
Junjie Zhang
Liujie Xie

Frontiers in Plant Science

doi 10.3389/fpls.2025.1584423

175 views

Original Research

Published on 28 Apr 2025

Whole-genome identification of HSF family genes in Cerasus humilis and expression analysis under high-temperature stress

in Plant Bioinformatics

Xiaopeng Mu
Jiating Zhang
Chenyi Wang
Liming Chen
Jianying Zhang
Pengfei Wang
Jiancheng Zhang
Bin Zhang
Junjie Du

Frontiers in Plant Science

doi 10.3389/fpls.2025.1553187

235 views

Original Research

Accepted on 27 Apr 2025

Pan-Genome Analysis of the R2R3-MYB Genes Family in Brassica napus Unveils Phylogenetic Divergence and Expression Profiles under Hormone and Abiotic Stress Treatments

in Plant Bioinformatics

Haiyan Fan
Jiawei Li
Wencong Huang
Aoshuang Liang
Liqing Jing
Jintao Li
Qing-Yong Yang
Kede Liu
Zhiquan Yang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1588362

117 views

Original Research

Published on 25 Apr 2025

Metabolome and transcriptome analyses reveal molecular responses of two potato (Solanum tuberosum L.) cultivars to cold stress

in Plant Bioinformatics

Xiang Li
Zhenzhen Zheng
Yun Zhou
Shenglong Yang
Wang Su
Heng Guo
Guangji Ye
Jian Wang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1543380

349 views

Original Research

Published on 24 Apr 2025

Organelle genomes of two Scaevola species, S. taccada and S. hainanensis, provide new insights into evolutionary divergence between Scaevola and its related species

in Plant Bioinformatics

Danni Meng
Tianxin Lu
Meng He
Yuze Ren
Mumei Fu
Yuxiao Zhang
Peifeng Yang
Xinyu Lin
Yong Yang
Ying Zhang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1587750

619 views

Original Research

Published on 24 Apr 2025

Analysis of the complete mitogenomes of three high economic value tea plants (Tea-oil Camellia) provide insights into evolution and phylogeny relationship

in Plant Bioinformatics

Heng Liang
Huasha Qi
Chunmei Wang
Yidan Wang
Moyang Liu
Jiali Chen
Xiuxiu Sun
Tengfei Xia
Shiling Feng
Cheng Chen

Frontiers in Plant Science

doi 10.3389/fpls.2025.1549185

521 views

Original Research

Accepted on 22 Apr 2025

SmilODB: A Multi-Omics Database for the Medicinal Plant Danshen (Salvia miltiorrhiza, Lamiaceae)

in Plant Bioinformatics

Yonghui Liu
Wen-Qiong Zeng
Si-Fan Tao
Yi-Nuo Du
Fei-Hong Yu
Zhechen Qi
Dongfeng Yang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1586268

Original Research

Accepted on 21 Apr 2025

Genomics reveal population structure, genetic diversity and evolutionary history of Phyllostachys edulis (Moso bamboo) in global natural distribution

in Plant Bioinformatics

Fangdi Li
Hongfeng Fang
Jie Zhou
Shunkai Hu
Fuliang Cao
QiRong GUO

Frontiers in Plant Science

doi 10.3389/fpls.2025.1532058

106 views

Original Research

Accepted on 16 Apr 2025

Comparative analysis of the organelle genomes of seven Rosa species (Rosaceae): insights into structural variation and phylogenetic position

in Plant Bioinformatics

Rongxiang Zhang
Shuwen Liu
Ying Liu
Pei Wei
Xiang Niyan
Yuemei Zhao
Xiaoman Gao
Yebing Yin
Lijun Qin
Tao Yuan

Frontiers in Plant Science

doi 10.3389/fpls.2025.1584289

Original Research

Accepted on 16 Apr 2025

Genome-wide identification of WRKY gene family and expression analysis of key WRKY genes in response to Fusarium solani infection in Lycium barbarum

in Plant Bioinformatics

Xia Wu
Nan Li
Bin Wang
Wei Chen
Chongqing Zhang
Yuyan Sun
Jing He

Frontiers in Plant Science

doi 10.3389/fpls.2025.1543373

Original Research

Published on 16 Apr 2025

Characterization of the NAC gene family in ‘Fengdan’ peony (Paeonia ostii) insights into the evolution and expression patterns under abiotic stresses and ABA treatment

in Plant Bioinformatics

Xiangli Yu
Qirui Meng
Hongyan Hou
Qiang Guo
Qingjie Wang
Yuqing Yang
Yanzhao Zhang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1559667

376 views

Original Research

Published on 15 Apr 2025

Genome-wide identification, phylogenetic investigation and abiotic stress responses analysis of the PP2C gene family in litchi (Litchi chinensis Sonn.)

in Plant Bioinformatics

Jie Yang
Rong Chen
Wei Liu
Chao Fan

Frontiers in Plant Science

doi 10.3389/fpls.2025.1547526

522 views

Original Research

Accepted on 11 Apr 2025

Genome-wide Identification of CDPKs in Jujube and Expression Profile Analysis in Response to Multiple Biological Processes

in Plant Bioinformatics

Lili Li
Ye Yuan
Bingqi Shen
Chong Chen
Lei Yang
Jin Juan
Dingyu Fan
Qing Hao

Frontiers in Plant Science

doi 10.3389/fpls.2025.1593446

232 views

Original Research

Accepted on 11 Apr 2025

De novo assembly and comparative analysis of the first complete mitogenome in Distylium (Distylium racemosum)

in Plant Bioinformatics

Yaling Wang
Zhongxiao Zhang
Xinru Chen
Honghe Li
Chi Ma
Penghui Guo

Frontiers in Plant Science

doi 10.3389/fpls.2025.1586341

125 views

Original Research

Accepted on 11 Apr 2025

Integrated metabolomic and transcriptomic analysis provide insights into the browning of walnut endocarps

in Plant Bioinformatics

Yifeng Wang
Mingxia Wang
Yaonian Chen
Wenbin Hu
Shuling Zhao

Frontiers in Plant Science

doi 10.3389/fpls.2025.1582209

113 views

Original Research

Published on 03 Apr 2025

A method of rice panicle number counting based on improved CSRNet model

in Plant Bioinformatics

Junyan Zhu
Jiaxing Huang
Yiyuan Wang
Jingyu Wang
Yongxian Wen

Frontiers in Plant Science

doi 10.3389/fpls.2025.1494564

531 views