Mass Spectrometry and New Computer-Based Tools in Plant Science Research

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ORIGINAL RESEARCH

Published on 20 Oct 2025

Comparative proteomic and metabolomic analyses reveal resistance mechanisms in Chilli pepper roots of resistant and susceptible varieties to Phytophthora capsici infection

Zhou Heng
Xiaowan Xu
Tao Li
Xiaomei Xu

doi 10.3389/fpls.2025.1638114

1,480 views
1 citation

ORIGINAL RESEARCH

Published on 10 Oct 2025

Comparative proteomic analysis of unfermented cocoa beans reveals key metabolic differences between fine-flavor and bulk genotypes

Ana Caroline de Oliveira
Didier Vertommen
Sébastien Pyr dit Ruys
Herve Rogez
Frédéric Debode
Dominique Mingeot
Pierre Bertin
Yordan Muhovski

doi 10.3389/fpls.2025.1674701

3,536 views

ORIGINAL RESEARCH

Published on 03 Jun 2025

Proteo-metabolomic analysis of fruits reveals molecular insights into variations among Italian Sweet Cherry (Prunus avium L.) accessions

Sabrina De Pascale
Antonio Dario Troise
Milena Petriccione
Angelina Nunziata
Danilo Cice
Elvira Ferrara
Andrea Scaloni
Anna Maria Salzano

doi 10.3389/fpls.2025.1591996

2,125 views

ORIGINAL RESEARCH

Published on 18 Feb 2025

Transcriptomic and proteomic analysis of oil body associated protein dynamics in the biofuel feedstock Pennycress (Thlaspi arvense)

María Ángeles Luján
Ana Claver
Patricia Lorente
M. Victoria López
Miguel Alfonso

doi 10.3389/fpls.2025.1530718

1,648 views
1 citation

ORIGINAL RESEARCH

Published on 20 Dec 2024

Integrated metabolomics and proteomics analysis reveals the accumulation mechanism of bioactive components in Polygonatum odoratum

Shuang Liang
Yang Zhao
Zhaohui Luo
Junchen Liu
Xicen Jiang
Bingxian Yang
Lin Zhang
Hongwei Fu
Zhuoheng Zhong

doi 10.3389/fpls.2024.1487613

2,442 views
6 citations

ORIGINAL RESEARCH

Published on 13 Nov 2024

Comparative transcriptomic and proteomic analyses of two salt-tolerant alfalfa (Medicago sativa L.) genotypes: investigation of the mechanisms underlying tolerance to salt

Jiahui Hang
Ting Song
Ling Zhang
Wenjun Hou
Xiaoxia Liu
Dongmei Ma

doi 10.3389/fpls.2024.1442963

1,963 views
7 citations

ORIGINAL RESEARCH

Published on 07 Nov 2024

Computational proteomics analysis of Taphrina deformans for the identification of antifungal drug targets and validation with commercial fungicides

Waqar Ahmad
Ziaur Rahman
Haji Khan
Javed Nawab
Hazir Rahman
Muhammad Faisal Siddiqui
Wajeeha Saeed

doi 10.3389/fpls.2024.1429890

2,469 views
2 citations

ORIGINAL RESEARCH

Published on 30 Oct 2024

Comparative proteomic analysis provides insights into wood formation in immature xylem at different ages in Eucalyptus urophylla × Eucalyptus grandis

Guo Liu
Guowu Zhang
Zhihua Wu
Wanhong Lu
Yan Lin
Chubiao Wang
Xiuhua Shang
Anying Huang
Jianzhong Luo

doi 10.3389/fpls.2024.1431164

1,702 views
1 citation

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Frontiers in Plant Science

Plant Proteomics and Protein Structural Biology
Plant Bioinformatics
Technical Advances in Plant Science

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Articles

Comparative proteomic and metabolomic analyses reveal resistance mechanisms in Chilli pepper roots of resistant and susceptible varieties to Phytophthora capsici infection

Comparative proteomic analysis of unfermented cocoa beans reveals key metabolic differences between fine-flavor and bulk genotypes

Proteo-metabolomic analysis of fruits reveals molecular insights into variations among Italian Sweet Cherry (Prunus avium L.) accessions

Transcriptomic and proteomic analysis of oil body associated protein dynamics in the biofuel feedstock Pennycress (Thlaspi arvense)

Integrated metabolomics and proteomics analysis reveals the accumulation mechanism of bioactive components in Polygonatum odoratum

Comparative transcriptomic and proteomic analyses of two salt-tolerant alfalfa (Medicago sativa L.) genotypes: investigation of the mechanisms underlying tolerance to salt

Computational proteomics analysis of Taphrina deformans for the identification of antifungal drug targets and validation with commercial fungicides

Comparative proteomic analysis provides insights into wood formation in immature xylem at different ages in Eucalyptus urophylla × Eucalyptus grandis

Frontiers in Plant Science

Plant Proteomics and Protein Structural Biology

Plant Bioinformatics

Technical Advances in Plant Science