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ORIGINAL RESEARCH article

Front. Plant Sci., 23 October 2025

Sec. Plant Abiotic Stress

Volume 16 - 2025 | https://doi.org/10.3389/fpls.2025.1641785

This article is part of the Research TopicAdvancing Plant Abiotic Stress Research with Integrated Multi-Omics TechnologiesView all 8 articles

Silica nanoparticles alleviate cadmium toxicity to Pisum sativum L. seedling growth by remodeling carbon-nitrogen metabolism

Xiaohuan Yang&#x;Xiaohuan Yang1†Weifeng Zhao&#x;Weifeng Zhao2†Hongxin Li,Hongxin Li1,3Lingling Sun,Lingling Sun2,4Liyin Wang,Liyin Wang1,5Ziran WangZiran Wang1Jingyi YangJingyi Yang1Baoqiong ZhangBaoqiong Zhang2Liangyi ZhaoLiangyi Zhao2Xibin ZhangXibin Zhang2Liangliang SunLiangliang Sun2Jinhu Ma,*Jinhu Ma1,6*
  • 1College of Agricultural, Shanxi Agricultural University, Taigu, China
  • 2College of Tropical Crop, Yunnan Agricultural University, Kunming, China
  • 3Agricultural and Rural Bureau of Fenyang, Lvliang, China
  • 4Shenyang Institute of Technology, Fushun, China
  • 5State Key Laboratory of Crop Gene Exploration and Utilization in Southwest China, Sichuan Agricultural University, Chengdu, China
  • 6College of Innovation and Entrepreneurship, Shanxi Agricultural University, Taigu, China

The increasing incidence of soil cadmium (Cd) pollution significantly hinders the sustainable development of agriculture and food security. Improving crop stress resistance through nanobiotechnology represents a secure and sustainable approach for increasing the efficiency of treating soils contaminated with heavy metals. This study investigated the physiological and molecular mechanisms by which silica nanoparticles (nSiO2) alleviate plant Cd toxicity via ZW6 pea as the experimental material. These results indicate that Cd treatment severely impedes the growth and development of peas. However, nSiO2 application notably increased the lateral root number (25.00%), primary root length (33.93%), leaf dry weight (29.18%), root dry weight (17.41%), and photosynthesis rate (13.84%), thereby reducing the degree of oxidative damage caused by Cd toxicity. Moreover, Cd content in the roots (22.24%) and leaves (67.88%) of pea seedlings decreased with nSiO2 treatment, improving mineral nutrition and alleviating Cd-induced growth inhibition. Transcriptomic analysis revealed differentially expressed genes (DEGs) in pea seedlings subjected to Cd toxicity and nSiO2 treatment, revealing the molecular response of these plants to Cd stress. The addition of nSiO2 alongside Cd toxicity altered the C/N metabolic pathway in peas, particularly affecting sucrose and amino acid metabolism. This study highlights the effectiveness of nSiO2 in reducing Cd accumulation, mitigating oxidative stress, enhancing micronutrient absorption, restructuring metabolic pathways, and alleviating the growth inhibition caused by Cd toxicity. These findings provide a theoretical framework for enhancing crop stress resistance in agriculture through nanoparticle technology, offering a novel strategy for managing farmland contamination by heavy metals and promoting sustainable agricultural practices.

1 Introduction

The heavy metal cadmium (Cd) is widely recognized as one of the most toxic substances, occurring naturally in sulfide form within various metal mines (Waalkes and Diwan, 1999). Cd is a non-threshold toxin, and it can exert toxic effects even at extremely low concentrations (Rahman and Singh, 2019). The contamination of farmland soil with Cd resulting from industrial waste discharge has been increasing due to advancements in the heavy industry and mining sectors (Jayakumar et al., 2021). In recent years, the high concentrations of heavy metals such as Cd in the atmosphere, the lithosphere, the hydrosphere, and the biosphere have become a global problem, and they have severe destructive effects on various microorganisms, plants, and animals (Rahman and Singh, 2019). The radial movement of Cd element in plants is restricted by the plasmalemma barrier of roots and the chelation effects such as plant chelating peptides and vacuolar isolation (Asare et al., 2023). Once absorbed by plant roots, Cd accumulates in plants, hindering their normal growth and development, resulting in stunted plant stature, leaf chlorosis, and reduced root and stem length (Kumar and Aery, 2016). In crops, Cd competes with mineral elements for absorption and interferes with the physiological characteristics of plants, thereby inhibiting their growth in soil contaminated with Cd. The toxicity and carcinogenicity of Cd pose a serious threat to crop growth, productivity and human health (Aslam et al., 2023).

In contrast to the physical adsorption of metal ions (Li et al., 2025), the accumulation of Cd in plants occurs through root absorption, exerting a toxic effect on plant physiology. This toxicity disrupts the antioxidant system, leading to cellular damage in roots and stems (Kumar and Aery, 2016). Research has demonstrated that Cd stress significantly inhibits the growth characteristics of wheat, including the number of leaves per plant, the number of tillers per plant, biomass yield, stem/root length, and leaf area. It also significantly reduces the photosynthetic efficiency of wheat. Furthermore, Cd stress greatly reduces the contents of proline, ascorbic acid (AsA), glycine betaine (GB), tocopherol, total free amino acids (TFAA), and total soluble sugar (TSS) (Farhat et al., 2022). The concentration of Cd in the growth environment and the plant genotype determine the Cd accumulation characteristics of the plant. Transport proteins effectively mediate the process by which Cd is transported from the xylem and phloem to the above-ground part (Asare et al., 2023). Components such as hemicellulose, pectin, and polygalacturonic acid in the cell wall effectively bind with Cd2+, reducing their uptake by roots (Ma et al., 2015). Excessive Cd in the plant body will prompt the generation of secondary metabolites with antioxidant properties to counteract its toxic effects (Asare et al., 2023). At the molecular level, Cd triggers an increase in glutathione (GSH) levels in plants, acting as a precursor for the ASA-GSH cycle that aids in scavenging reactive oxygen species (ROS), maintaining homeostasis, and ensuring normal genetic processes under Cd-induced stress (Zechmann et al., 2008). Cd is sequestered either extracellularly or intracellularly in plant tissues after being transported from the roots to the aboveground parts. The ATP-binding cassette (ABC) transporter protein family, recognized as crucial for plant heavy metal detoxification, helps in handling Cd toxicity by sequestering chelated Cd.

Nanoparticles (NPs) exhibit surface and interface effects, as well as microsize effects, making them valuable tools in agricultural applications (Sajid and Płotka-Wasylka, 2020). Akpomie et al. (2023) elaborated on the adsorption mechanisms of heavy metal pollutants onto zinc oxide nanoparticles. They proposed that complexation, precipitation, ion exchange, and electrostatic interactions could serve as plausible mechanisms for adsorption onto zinc oxide nanoparticles, with complexation being identified as the dominant process. Silica nanoparticles (nSiO2, Nano-SiO2) can promote plant growth and development while enhancing plant resilience to stress factors. Previous studies have explored how nSiO2 mitigate Cd stress in crops such as rice, barley, and maize. However, these studies have focused on monocotyledonous plants, primarily investigating how nSiO2 influences Cd tolerance through physiological response pathways (Ahmed et al., 2023; Anwar et al., 2025; Rhimi et al., 2024). Studies have shown that nSiO2 can significantly increase the concentration of photosynthetic pigments, improve cellular osmotic adjustment, and markedly enhance the activity of antioxidant enzymes such as SOD, CAT, and APX, thereby alleviating oxidative damage (Anwar et al., 2025). Nano-SiO2 can bind with chloroplasts in leaves, resulting in an increase in chlorophyll content, improved gas exchange, and increased photosynthesis in plants (Siddiqui et al., 2015). Research has indicated that nSiO2 effectively binds with Cd on the rice cell wall, thereby reducing Cd absorption under Cd stress conditions. Moreover, nSiO2 has been shown to suppress the expression of Cd transport-related genes such as OsLCT1 and OsNramp5 in rice, thus mitigating Cd-induced harm to plants (Cui et al., 2017). Nevertheless, the mechanism by which nSiO2 affects the response to Cd toxicity in legumes, particularly peas (Pisum sativum L.), remains unclear. Pea is selected as a model legume due to its economic importance as a global crop and its ecological relevance in sustainable agriculture. Although advanced adsorption modeling frameworks have been employed to quantify nanoparticle–metal interactions across various environmental contexts (Zeng et al., 2018), the application of such theoretical approaches remains markedly underexplored in leguminous plant systems such as peas—particularly under nSiO2 amendment—representing a critical knowledge gap in understanding the mechanistic basis of nanotechnology-enhanced phytoremediation. Consequently, our study delves into the physiological and molecular mechanisms behind nSiO2-mediated Cd accumulation in peas. In contrast, this study explores, through physiological mechanism analysis, how nSiO2 regulates the response of pea plants to Cd stress. Furthermore, by employing high-throughput sequencing technology, this research combines transcriptome analysis with physiological responses under nSiO2+Cd stress for the first time, to investigate the response patterns of peas to Cd stress. The specific objectives of this study are to: (1) evaluate the effects of nSiO2 on growth and physiological parameters under Cd stress; (2) analyze the transcriptomic changes in peas exposed to combined nSiO2 and Cd treatment; and (3) identify key pathways and genes involved in nSiO2-induced mitigation of Cd toxicity.

2 Materials and methods

2.1 Plant material and growth conditions

The pea (Pisum sativum L.) variety used in this study was Zhongwan 6 (ZW6). In this study, the Hoagland nutrient solution hydroponics method was employed for plant tissue culture and drug treatment. Pea seeds with complete grains and uniform sizes were carefully selected, followed by germination promotion at 28 °C in moist sand. Once the pea seedling roots reached a length of 0.5–1 cm (typically within 1–2 d), seedlings exhibiting similar growth patterns were chosen. The sand adhering to the root surface was subsequently rinsed with distilled water before being transferred into a 1/4-strength Hoagland nutrient solution (Xu et al., 2013). The hydroponic box was then placed on a light culture rack for seedling cultivation under specific conditions (light/dark: 18/6 h, temperature: 25/16 °C, humidity: 60%, light intensity: 20000 lux). During seedling cultivation, the nutrient mixture was replaced every 3 days. Ten-day-old pea seedlings were exposed to Cd (9 μM, cadmium chloride (CdCl2) was used as the source of Cd) or nSiO2 (50 mg/L) for 12 d. The selected concentrations of Cd and nSiO2 used in this experiment have been previously investigated and reported in existing studies (Głowacka et al., 2019; Ghosh et al., 2022). After 12 d of treatment, a range of physiological and biochemical analyses were conducted. Some samples were quickly frozen in liquid nitrogen after sampling and stored at -80 °C for later use.

2.2 The nSiO2 stock preparation

In this study, nSiO2 (purity 99%, size 50 ± 5 nm) was purchased from McLean Biotechnology Co., Ltd. Numerous studies have employed X-ray diffraction (XRD) to analyze the crystallinity of nSiO2, Fourier-transform infrared spectroscopy (FTIR) to detect its surface functional groups, and high-resolution transmission electron microscopy (HR-TEM) to characterize the shape, size, and morphology of nSiO2 in aqueous environments. XRD measurements were conducted on a Rigaku SmartLab diffractometer using Cu Kα radiation (λ = 1.5406 Å), with a scanning range from 10° to 80° (2θ), a step size of 0.02°, and a scanning speed of 2° per minute. The FTIR analysis was performed using a Thermo Scientific Nicolet iS10 spectrometer, with scans acquired over the range of 4000–400 cm⁻¹ at a resolution of 4 cm⁻¹, accumulating 32 scans per sample (Cui et al., 2017; Ghosh et al., 2022; Liu et al., 2025). nSiO2 was suspended in sterile deionized water (ddH2O), stirred for 2 h, and homogenized by ultrasonication at 40 kHz for 60 min until the NPs were evenly distributed, as described previously (Cui et al., 2017; Zou et al., 2022). The final working concentration of nSiO2 for plant treatment was 50 mg/L.

2.3 Phenotypic parameters

Plant growth parameters (including plant height, primary root (PR) length, leaf dry weight (DW), root DW, lateral root number, chlorophyll content and photosynthetic parameters) were measured after 12 d of Cd, nSiO2 or combined treatment. The roots were placed in a scanning dish, the pea root system was scanned via a scanner (EPSON Perfection V800 Photo), and the results were analyzed via WinRHIZO (Pro2016A). The chlorophyll content was measured via SPAD 502 (Minolta, Japan). At least three independent biological replicates were performed, with 25 plants measured in each treatment group.

2.4 Analysis of antioxidant enzyme activity

Total protein was extracted in potassium phosphate buffer (50 mM, pH 7.8) on ice. After centrifugation (15 min, 15000 rpm, 4 °C), the supernatant was removed for determination of SOD, CAT, and POD activities. SOD activity was measured as described by Gong et al. (2014) with a spectrophotometer. Briefly, samples were homogenized in ice-cold 50 mM phosphate buffer (pH 7.4). The assay system contained 50 mM phosphate buffer (pH 7.8), 100 μM EDTA, 50 mM xanthine, 24 μM NBT, and sample. The reaction was initiated by adding 50 mU/mL xanthine oxidase and incubated at 25 °C for 20 min. The absorbance of the formazan product was read at 560 nm using a spectrophotometer (Shimadzu UV-1800) (n = 3). One unit of SOD activity was defined as the amount of enzyme causing 50% inhibition of NBT reduction. Activity was normalized to protein concentration determined by BCA assay and expressed as U/mg protein. CAT activity was measured following Sun et al. (2020). The reaction mixture contained 50 mM phosphate buffer (pH 7.0), 30 mM H2O2, and enzyme extract. The decomposition of H2O2 was monitored by the decrease in absorbance at 240 nm for 1 min using a spectrophotometer (Shimadzu UV-1800) (n = 3). One unit of CAT activity was defined as the amount of enzyme that decomposed 1 μmol H2O2 per minute and was expressed as U/min/mg protein. POD activity was determined according to Sun et al. (2020). The assay contained 50 mM phosphate buffer (pH 7.0), 10 mM guaiacol, 5 mM H2O2, and enzyme extract. The increase in absorbance due to tetraguaiacol formation was recorded at 470 nm for 2 min using a spectrophotometer (Shimadzu UV-1800) (n = 3). One unit of POD activity was defined as the amount of enzyme that caused an increase of 0.01 in absorbance per minute and was expressed as U/min/mg protein.

2.5 Hydrogen peroxide determination

Hydrogen peroxide (H2O2) content was assayed as described by Gong et al. (2014) using a spectrophotometer. Briefly, samples were homogenized in cold acetone. The reaction mixture contained extract, 0.1% titanium sulfate, and 0.2 M H2SO4. After incubation at 25 °C for 10 min, the absorbance was measured at 415 nm using a spectrophotometer (Shimadzu UV-1800) (n = 3). H2O2 content was quantified against a standard curve and expressed as μmol/g fresh weight.

2.6 Root activity determination

In this study, the TTC method was employed to quantify root activity. Initially, 0.2 g of fresh pea root was accurately weighed and placed in a triangular bottle. A solution containing 0.5% TTC and 0.1 M phosphate buffer (pH=7.5) was subsequently added in equal volumes and thoroughly mixed with the sample before being incubated at 37 °C for 1 h. Following the incubation period, termination of the reaction was achieved by adding 1 M H2SO4 solution to the triangular bottle. The pretreated roots were then ground with ethyl acetate via a mortar, after which the absorbance value of the resulting liquid extract was measured at 485 nm following volume standardization (n = 3). Root activity was quantified on the basis of the reduction intensity of TTC.

2.7 Determination of photosynthetic characteristics

The leaves (No. 2–3 pairs) of pea plants subjected to different treatments were carefully selected, and the relevant photosynthetic data were measured via LI-6800 portable photosynthesis system (LI-COR) under natural light conditions. The intensity of photosynthetically active radiation (PAR) was set at 500 μmol·m-2·s-1, while the relative humidity (RH) was maintained at 50%. Measurements were taken for the net photosynthetic rate (Pn, μmol·m-2·s-1), stomatal conductance (Gsw, mol·m-2·s-1), and transpiration rate (Tr, mmol H2O·m-2·s-1). After 3 h in darkness to culture the pea plants, the chlorophyll fluorescence indices of the leaves were subsequently determined via pulse-modulated fluorometry equipment (Image-PAMM, Walz, Germany) with 25 plants measured in each treatment group.

2.8 Mineral element determination

After treatment, the roots and leaves of the pea plants in each group were collected. The samples were soaked in 1 mM EDTA solution for 30 min and then rinsed 5 times with ddH2O. The samples were subsequently fixed for 15 min at 105 °C and dried to a constant weight at 70 °C. The dried sample was ground and digested with HNO3 according to the methods of Sun et al. (2020). We initially measured a 0.2 g sample, which was subsequently transferred to a clean digestion tube for nitric acid (HNO3) digestion. The resulting solution was subsequently filtered through a microporous filter membrane (pore size 0.22 µm) before being transferred into a sample vial for measurement purposes. The contents of Cd, zinc (Zn), copper (Cu), magnesium (Mg), iron (Fe) and silicon (Si) were determined via inductively coupled plasma–mass spectrometry (ICP–MS). Each experiment was repeated three times.

2.9 Comparative transcriptome analysis

Ten-day-old pea seedlings were exposed to Cd, nSiO, or a combination of both. After a 2-day treatment and culture period, the roots and leaves of the peas in each treatment group were collected. Total RNA was extracted by grinding frozen samples with liquid nitrogen for subsequent transcriptomic high-throughput sequencing and qRT–PCR experiments (n = 3). The obtained transcriptome data were subjected to a bioinformatics analysis process provided by BMKCloud (www.biocloud.net). Differential expression analysis and functional annotation of differentially expressed genes (DEGs) via Kyoto Encyclopedia of Genes and Genomes (KEGG) were performed on the basis of gene expression levels in different sample groups. Gene reads represent gene expression levels, with fragments per kilobase of transcript per million fragments mapped (FPKM) values commonly used as a measure for convenience.

Genes exhibiting significantly different expression levels across samples are referred to as DEGs. During the process of detecting differentially expressed genes, the screening criteria were set as a fold change ≥ 2 and the FDR < 0.01. The fold change represents the ratio of expression between two samples, whereas the false discovery rate (FDR) is derived from correcting the significance p value (p-value), indicating the level of significance for differences observed. To facilitate comparison, the fold changes were paired and represented as log2FC values. The log2FC transformation was applied to normalize the gene expression data. The screening criteria for differentially expressed genes included a |log2(fold change)| ≥1 and q value ≤ 0.05.

2.10 Statistical analysis

Three independent biological replicates were used for each experiment in our study. The relevant figures were graphed with the software GraphPad Prism 8 and enhanced with Adobe Photoshop 2019 CC. The experimental results are shown as the means ± standard errors (SEs). The significance of differences was analyzed via Student’s t test (IBM SPSS Statistics 23.0). The asterisk indicates P < 0.05. One-way ANOVA with Tukey’s test was used to compare multiple groups. Different lowercase letters represent significant differences at P < 0.05.

3 Results

3.1 Effects of nSiO2 on the early growth of pea seedlings under Cd stress

The effects of Cd on the growth of pea seedlings were analyzed in this study. The application of Cd adversely affected various growth parameters of the seedlings, resulting in reductions of 49.43% in plant height (compared with the control 105.89 ± 7.21 mm), 34.81% in primary root length (compared with the control 89.15 ± 5.77 mm), 27.03% in lateral root number (compared with the control 37 ± 1.33 roots), 39.87% in leaf dry weight (DW) (compared with the control 0.3958 ± 0.0230 g), and 24.83% in root DW (compared with the control 0.1180 ± 0.0058 g) (Figures 1A–F). In contrast, exposure to nSiO2 significantly increased the height of pea plants compared with those in the control group (Figures 1A, F). Furthermore, exposure to nSiO2 under Cd stress conditions stimulated the growth of pea seedlings. As shown in Figures 1A–E, the Cd+nSiO2 treatment group presented increases of 33.93% in primary root length, 25.00% in lateral root number, 29.18% in leaf DW, and 17.41% in root DW compared with those of the seedlings treated with Cd alone. Cd stress not only hindered leaf expansion in pea plants but also decreased the leaf count (Figure 1A). Notably, exposure to nSiO2 significantly increased the growth and development of pea leaves compared with those in the control group (Figure 1A). Exposure to nSiO2 under Cd stress conditions significantly promoted leaf growth (Figures 1A, D). Ultimately, exposure to nSiO2 increased Cd tolerance in pea seedlings, thereby increasing their overall growth and development.

Figure 1
Panel A shows four plants under different treatments: Control, Cd, Cd plus nSiO₂, and nSiO₂. Panels B-H display bar graphs comparing these treatments across various metrics: lateral root number, primary root length, leaf dry weight, root dry weight, plant height, TTC reduction strength, and pectin methyl esterase activity. Panel I shows images of seedlings under the same treatments. The graphs illustrate significant differences marked by letters a, b, and c, indicating statistical variance.

Figure 1. Nano-SiO2 alleviates Cd-mediated pea seedling growth inhibition. Ten-day-old pea plants were transferred to 1/4-strength fresh Hoagland solution with or without 9 μM CdCl2, 50 mg/L nSiO2 (Control, Cd, Cd+nSiO2, nSiO2)for 12 days (bar = 10 cm), (A) phenotypic images of pea seedlings under four treatments, (B) the lateral root number, (C) primary root length, (D) leaf dry weight (DW), (E) root DW, (F) plant height, (G) TTC (2,3,5-triphenyltetrazolium chloride) reduction strength, (H) Pectin Methyl esterase were measured. Two-day-old germinated pea seedlings were transferred to 1/4-strength fresh Hoagland solution with or without 9 μM CdCl2, 50 mg/L nSiO2 (Control, Cd, Cd+nSiO2, nSiO2) for a 24-hour treatment period. (I) The seed germination and radicle growth phenotype of peas (bar = 10 mm). The results shown are the means ± SDs (n=3), and different letters indicate significant differences (P < 0.05 according to Tukey’s test).

On the other hand, Cd toxicity significantly inhibited the activity of pea seedling roots by 26.48% (Figure 1G). Compared with the control, exposure to nSiO2 had no significant effect on the root activity of pea seedlings (Figure 1G). When pea seedlings were exposed to nSiO2, the activity of pea seedling roots increased under Cd toxicity. As shown in Figure 1G, the group treated with ‘Cd+nSiO2’ presented a notable increase in root activity of 15.52% compared with that in the Cd-only treatment group. The activity of pectin methylesterase (PME) is crucial for protecting plant root tips from stress (Chen et al., 2018). Therefore, we investigated PME activity in pea root tips subjected to Cd toxicity, nSiO2 exposure, or combined Cd+nSiO2 treatment. Cd toxicity increased PME activity in pea seedling root tips by 22.85% (Figure 1H). Compared with the control, exposure to nSiO2 did not significantly affect PME activity in pea seedling root tips (Figure 1H). In contrast, exposure to nSiO2 significantly reduced PME activity in pea seedling root tips under Cd stress conditions. As depicted in Figure 1H, the ‘Cd+nSiO2’ group presented a substantial 14.23% decrease in PME activity in pea seedling root tips compared with the Cd treatment alone group. Moreover, Cd toxicity strongly inhibited both seed germination and radicle growth in peas; however, exposure to nSiO2 increased pea seed germination and radicle growth under Cd stress conditions (Figure 1I).

3.2 Effect of nSiO2 on the ROS content of pea seedlings under Cd stress

The accumulation of ROS serves as a critical indicator of plant responses to both biotic and abiotic stresses. In this study, we examined ROS accumulation in pea seedlings exposed to Cd toxicity, nSiO2 exposure, or a combination of both. Fluorescence staining for total ROS indicated a significant increase in ROS levels in the roots of pea seedlings under Cd toxicity (Figure 2A). NBT staining analysis of pea seedling roots revealed elevated superoxide anion (O2¯) levels under Cd toxicity (Figure 2B). Exposure to nSiO2 resulted in a reduction in ROS accumulation in pea roots under Cd stress (Figures 2A, B). Quantitative analysis revealed that under Cd stress, O2¯ and hydrogen peroxide (H2O2) levels in pea seedlings increased by 151.24%, 119.57%, 150.51%, and 73.96% in roots and leaves, respectively (Figures 2C, D; Supplementary Figures S1A, B). However, exposure to nSiO2 did not affect the levels of O2¯ or H2O2 in either the roots or leaves of pea seedlings compared with those in the control group (Figures 2C, D; Supplementary Figures S1A, B). Notably, in the Cd+nSiO2 group, the levels of O2¯ and H2O2 in the root and leaf tissues were reduced by 31.68%, 39.9%, 39.69%, and 59.97%, respectively, compared with those in the Cd treatment alone group (Figures 2C, D; Supplementary Figures S1A, B).

Figure 2
Images showing the effects of different treatments on plant roots and several biochemical parameters. Panel A displays four plant root tips under different conditions: Control, Cd, Cd+nSiO₂, and nSiO₂. Panel B presents root physical changes with the same treatments. Graphs C to I show data on biochemical parameters: O₂⁻ content, H₂O₂ content, SOD activity, CAT activity, POD activity, MDA content, and relative conductivity. Different letters indicate statistically significant differences among treatments.

Figure 2. Nano-SiO2 exposure alleviated Cd-induced oxidative damage in pea seedling roots. Two-day-old germinated pea seedlings were transferred to 1/4-strength fresh Hoagland solution with or without 9 μM CdCl2, 50 mg/L nSiO2 (Control, Cd, Cd+nSiO2, nSiO2) for 5 days (bar = 100 μm). (A) Detection of ROS production in the roots of four treatments pea seedlings using the ROS-specific fluorescent probe DCFH-DA (bar = 100 μm) and (B) detection of O2- production using NBT in pea roots (bar = 10 mm). The (C) O2¯ levels, (D) H2O2 levels, (E) SOD activity, (F) CAT activity, (G) POD activity, (H) MDA levels and (I) Relative electrical conductivity were measured. The results are presented as the means ± SDs (n=3). Different letters indicate significant differences (P < 0.05 according to Tukey’s test).

3.3 Effect of nSiO2 on the antioxidant enzyme activity of pea seedlings under Cd stress

We subsequently investigated the activity of antioxidant system-related enzymes in pea seedlings subjected to Cd toxicity, nSiO2 exposure, or Cd+nSiO2 interactive treatment. These findings revealed that Cd triggered an increase in SOD activity in both the roots and leaves of pea plants. Specifically, compared with the control, Cd toxicity significantly increased SOD activity by 11.69% in pea seedling roots (Figure 2E). Conversely, when exposed to nSiO2 under Cd stress, SOD activity decreased by 5.30% compared with that under Cd treatment alone (Figure 2E). Similarly, compared with the control, Cd toxicity led to a significant increase of 23.71% in SOD activity in the leaves of pea seedlings (Supplementary Figure S1C). However, when exposed to nSiO2 under Cd stress, SOD activity was reduced by 9.88% compared with that under Cd alone (Supplementary Figure S1C).

On the other hand, compared with the control, exposure to Cd significantly increased the CAT activity in the roots and leaves of pea plants by 212.53% and 137.81%, respectively (Figure 2F; Supplementary Figure S1D). However, compared with the Cd treatment alone, the Cd+nSiO2 interaction treatment resulted in decreases in CAT activity of 54.12% and 30.15% in the roots and leaves of pea seedlings, respectively (Figure 2F; Supplementary Figure S1D). In addition, compared with the control, exposure to Cd significantly increased POD activity in the roots and leaves of pea plants by 26.71% and 87.57%, respectively (Figure 2G; Supplementary Figure S1E). However, compared with the Cd treatment alone, the Cd+nSiO2 interaction treatment resulted in decreases in POD activity of 14.23% and 28.98% in the roots and leaves of pea seedlings, respectively (Figure 2G; Supplementary Figure S1E).

3.4 Effect of nSiO2 on the cell membrane permeability of pea seedlings under Cd stress

The degree of oxidative damage and lipid peroxidation can be evaluated by the malondialdehyde (MDA) content in plants (Barclay and McKersie, 1994). We measured MDA levels in pea seedlings. Compared with that in the control plants, the content of MDA in the roots and leaves of pea plants significantly increased by 167.94% and 293.25%, respectively, under Cd stress (Figure 2H; Supplementary Figure S1F). Under Cd stress, the MDA content in the roots and leaves of pea seedlings treated with Cd+nSiO2 decreased significantly, by 30.07% and 60.90%, respectively, compared with that in the roots and leaves of pea seedlings treated with Cd alone (Figure 2H; Supplementary Figure S1F). Additionally, the relative electrical conductivity of pea seedlings can serve as an indicator of cell membrane permeability. Our results revealed that, compared with the control, Cd stress significantly increased the relative electrical conductivity of the roots and leaves of pea plants by 48.97% and 59.86%, respectively (Figure 2I; Supplementary Figure S1G). Compared with Cd treatment alone, treatment with Cd+nSiO2 resulted in a decrease in the relative electrical conductivity of pea seedling roots and leaves by 31.37% and 31.10%, respectively ((Figure 2I; Supplementary Figure S1G).

3.5 Effects of nSiO2 on the photosynthetic characteristics of pea seedlings under Cd stress

By observing the phenotype of pea plants, we found that Cd toxicity significantly impeded the growth and development of pea leaves (Figure 1A). We subsequently analyzed the relevant parameters of photosynthetic efficiency in pea seedlings subjected to Cd toxicity, nSiO2 exposure, or Cd+nSiO2 interactive treatment. The results indicated that a significant decrease in the photosynthetic rate of pea seedlings was affected by Cd toxicity (Figures 3A–D). Specifically, Cd toxicity led to substantial reductions of 45.23%, 40.63%, 57.39%, and 52.55% in the net photosynthetic rate (Pn), transpiration rate (Tr), stomatal conductance (Gs), and total conductance to CO2 (gtc), respectively, compared with those of the control (Figures 3A–D). However, under Cd stress, the combined treatment with Cd+nSiO2 increased the Pn, Tr, Gs, and gtc values by approximately 13.84%, 43.86%, 53.73%, and 48.31%, respectively, compared with those under Cd treatment alone (Figures 3A–D).

Figure 3
Bar graphs and a fluorescence image depict the effects of different treatments on plant physiological parameters. Graphs A-D show variations in net photosynthesis (Pn), transpiration rate (Tr), stomatal conductance (Gs), and maximum photochemical efficiency of PSII (gfc) under control, Cd, Cd+SiO2, and nSiO2 treatments. Graph E presents fluorescence images comparing parameters such as qL, Fo, Fm, Fv/Fm, and qP. Graphs F-H depict the effects on Fv/Fm, qL, and qP across the treatments, with significant differences indicated by letters a, b, and c.

Figure 3. Nano-SiO2 exposure alleviated the inhibition of photosynthesis in pea plants induced by Cd. Ten-day-old germinated pea seedlings were transferred to 1/4-strength fresh Hoagland solution with or without 9 μM CdCl2, 50 mg/L nSiO2 (Control, Cd, Cd+nSiO2, nSiO2) for 12 days. The photosynthetic parameters (A) Pn, (B) Tr, (C) Gs and (D) gtc were measured. . (E) Representative chlorophyll fluorescence images and (F–H) quantification of (F) Fv/Fm, (G) qL and (H) qP. The results are presented as the means ± SDs (n=3). Different letters indicate significant differences (P < 0.05 according to Tukey’s test).

We then detected and analyzed the chlorophyll fluorescence-related parameters of the pea seedlings in each group. Compared with the control, Cd toxicity significantly reduced the maximal photosystem II (PSII) activity parameter (Fv/Fm) of pea seedlings by 16.93% (Figures 3E, F). Compared with the Cd alone treatment, the Cd+nSiO2 interaction treatment increased the Fv/Fm of the pea seedlings to 16.99% (Figures 3E, F). Conversely, compared with the control, Cd toxicity significantly increased the photochemical quenching coefficient (qP) and qL of pea seedlings by 20.37% and 73.98%, respectively (Figures 3E, G, H). Compared with Cd alone, the Cd+nSiO2 interaction treatment decreased the qP and qL of pea seedlings by 16.13% and 40.96%, respectively (Figures 3E, G, H).

3.6 Effects of nSiO2 on Cd and mineral element accumulation in pea seedlings under Cd stress

The mineral element content of the pea seedlings was determined via inductively coupled plasma emission spectrometry (ICP–MS). Compared with Cd stress alone, the Cd+nSiO2 interaction treatment significantly reduced the Cd content in both the roots and leaves of pea seedlings by 22.24% and 67.88%, respectively (Figure 4A; Supplementary Figure S2A). All three independent biological replicates produced consistent results, confirming the reproducibility of the findings. Moreover, compared with the control, Cd toxicity increased the accumulation level of Fe in both the roots and leaves of pea plants by 44.06% and 42.51%, respectively (Figure 4B; Supplementary Figure S2B), with a significant increase observed specifically in the roots. However, there was no significant effect on Fe accumulation in pea seedlings subjected to the Cd+nSiO2 interaction treatment compared with those subjected to Cd toxicity alone (Figure 4B; Supplementary Figure S2B).

Figure 4
Bar graphs labeled A to F compare the root content of Cd, Fe, Cu, Mg, Zn, and Si in mg/kg across four treatment groups: Control, Cd, Cd + nSiO₂, and nSiO₂. Significance levels are denoted by letters 'a', 'b', 'c', indicated on each bar, showing differences among the treatments. Bars display means with error margins.

Figure 4. Nano-SiO2 exposure reduced Cd accumulation and improved the accumulation of mineral elements in pea roots under Cd stress. Ten-day-old germinated pea seedlings were transferred to 1/4-strength fresh Hoagland solution with or without 9 μM CdCl2, 50 mg/L nSiO2 (Control, Cd, Cd+nSiO2, nSiO2) for 12 days. The concentrations of (A) Cd, (B) Fe, (C) Cu, (D) Mg, (E) Zn and (F) Si were measured. The results are presented as the means ± SDs (n=3). Different letters indicate significant differences (P < 0.05 according to Tukey’s test).

On the other hand, compared with the control, Cd toxicity significantly suppressed the accumulation of Cu, Mg, Zn, and Si in the roots of pea plants by 70.01%, 30.17%, 78.68%, and 49.55%, respectively (Figures 4C–F). Under Cd stress, the combined treatment of Cd+nSiO2 had no significant effect on the accumulation levels of Cu, Mg or Zn in pea seedlings (Figures 4C–E). Moreover, compared with the control, Cd toxicity inhibited the accumulation of Cu, Mg and Zn in the leaves of pea plants by 74.85%, 29.62%, and 54.05%, respectively (Supplementary Figures S2C–E). Under Cd stress, the Cd+nSiO2 interaction treatment promoted the accumulation of Cu, Mg and Zn in pea seedlings (Supplementary Figures S2C–E), but this difference did not reach statistical significance.

3.7 Transcriptome analysis

To explore the molecular mechanism underlying the alleviation of Cd toxicity to pea seedlings by nSiO2 and elucidate the potential regulatory pathway of the nSiO2-mediated response to Cd stress in pea, we performed transcriptome sequencing analysis on pea seedlings exposed to Cd toxicity, nSiO2 treatment, or Cd+nSiO2 interactive treatment. Each group of samples was subjected to three biological replicates, and the statistics of the filter quality control results are presented in Supplementary Table S1. After filtering the original sequencing data, we obtained a total of 151.26 Gb of clean data. The percentage of Q30 bases in all the transcriptome samples was 91.37% or greater, indicating acceptable data quality for each sample (Supplementary Table S1).

We then generated an FPKM box plot to visualize the gene expression of each transcriptome sample (Supplementary Figure S3). The discrete distribution of gene expression in the transcriptome samples of each group directly reflects the overall gene expression of different samples (Supplementary Figure S3). Additionally, we evaluated the dispersion of samples within each treatment group via principal component analysis (PCA). In Figures 5A, B, PC1 on the x-axis represents the first principal component, with its percentage indicating its contribution to sample differences. The contribution values of the first principal component in the roots and leaves of the pea seedlings to the sample difference were 30.18% and 34.33%, respectively (Figures 5A, B). On the y-axis, PC2 represents the second principal component. The contribution values of the second principal component in the roots and leaves of the pea seedlings to the sample difference were 14.70% and 12.60%, respectively (Figures 5A, B). These results indicate that the similarity between the transcriptome repeats is high, which meets the requirements of transcriptome data analysis and can be used for subsequent differentially expressed genes (DEGs) analysis.

Figure 5
Six-part figure displaying analysis of plant responses to treatments:   A and B: Principal component analysis (PCA) plots for different treatments, showing variance percentages and diversity index (DI) values. C and D: Venn diagrams comparing gene expression across treatments, highlighting overlapping and unique genes. E and F: Bar graphs indicating differentially expressed genes (DEGs) in roots (1,682 DEGs) and leaves (3,530 DEGs) with upregulated (pink) and downregulated (cyan) counts across various comparisons.   Comparisons include control, cadmium (Cd), Cd with silica (Cd+nSiO₂), and silica alone (nSiO₂).

Figure 5. Transcriptome analysis of differentially expressed genes in pea seedlings treated with nSiO2 or Cd. Ten-day-old germinated pea seedlings were transferred to 1/4-strength fresh Hoagland solution with or without 9 μM CdCl2, 50 mg/L nSiO2 (Control, Cd, Cd+nSiO2, nSiO2) for 2 days. (A, B) Principal component analysis (PCA) score plots of pea (A) roots and (B) leaves. (C, D) Venn diagram analysis of differentially expressed genes (DEGs) in the (C) roots and (D) leaves of Control, Cd, nSiO2 and Cd+nSiO2 plants. (E, F) The number of upregulated and downregulated DEGs in the (E) roots and (F) leaves of the Cd/Control, nSiO2/Control, Cd+nSiO2/Control and Cd+nSiO2/Cd comparisons.

3.8 Analysis of DEGs in pea seedlings in each group

The Venn diagram provides a visual representation of the common and unique genes detected in each transcriptome sample. Figures 5C, D show Venn diagrams depicting gene detection between four treated transcriptome samples from pea roots and leaves, respectively. A total of 20,979 genes were detected in pea roots (Figure 5C). Among these genes, 18,297 coexpressed genes were unrelated to exogenous treatment. Additionally, 908 genes whose expression was specifically associated with only Cd toxicity (the Cd toxicity and Cd+nSiO2 treatment groups) were identified. Furthermore, 171 genes were specifically expressed in response to the Cd+nSiO2 treatment (Figure 5C). Similarly, a total of 18,847 genes were detected in pea leaves (Figure 5D). Among these genes, 15,753 coexpressed genes were not related to exogenous treatment. Moreover, there were 1,033 genes whose expression was exclusively associated with Cd toxicity (the Cd toxicity and Cd+nSiO2 treatment groups). Finally, 278 genes were specifically expressed in response to the Cd+nSiO2 treatment (Figure 5D).

The DEGs (|log2FC|≥1 and q value ≤ 0.05) were subsequently subjected to further analysis among the various pea seedling treatment groups. Comparative analysis revealed 1682 and 3530 DEGs in the roots and leaves of pea seedlings, respectively (Figures 5E, F). Compared with those in the control, a total of 1386 DEGs (including 451 upregulated and 935 downregulated) and 3624 DEGs (including 1606 upregulated and 2018 downregulated) were identified in the roots and leaves of pea seedlings under Cd toxicity (Cd/control), respectively (Figures 5E, F). In addition, 34 DEGs (including 13 upregulated DEGs and 21 downregulated DEGs) and 422 DEGs (including 88 upregulated DEGs and 334 downregulated DEGs) were identified in the roots and leaves of pea seedlings treated with nSiO2 (nSiO2/control) (Figures 5E, F). A total of 1220 DEGs (including 219 upregulated and 1001 downregulated) and 348 DEGs (including 17 upregulated and 331 downregulated) were identified in the roots and leaves of pea seedlings treated with Cd+nSiO2 (Cd+nSiO2/Control), respectively (Figures 5E, F). In addition, compared with those under the Cd treatment alone, 22 DEGs (3 upregulated and 19 downregulated) and 812 DEGs (158 upregulated and 654 downregulated) were identified in the roots and leaves of peas under the Cd+nSiO2 treatment (Cd+nSiO2/Cd), respectively (Figures 5E, F).

3.9 DEGs cluster analysis of pea seedlings subjected to Cd toxicity and nSiO2 exposure

We subsequently used the K-means algorithm to perform cluster analysis on 1682 DEGs identified in the root samples of the four groups of pea seedlings under different treatments. The clustering results revealed that these DEGs were clustered into 6 gene clusters (Figure 6A). The number of DEGs in cluster 1, cluster 2, cluster 3, cluster 4, cluster 5 and cluster 6 in the roots of the pea seedlings was 315, 250, 386, 268, 203 and 260, respectively (Figure 6A). As shown in Figure 6B, Cd toxicity significantly induced gene expression in cluster 1, cluster 2, cluster 3, and cluster 5 in the roots of pea seedlings. In contrast, Cd toxicity significantly inhibited gene expression in Clusters 4 and 6 (Figures 6A, B). Further analysis revealed that the expression of genes in cluster 4 slightly increased under nSiO2 exposure, significantly decreased under Cd toxicity, and slightly increased under the Cd+nSiO2 interactive treatment (compared with that under Cd toxicity alone) (Figure 6B). The expression trends of these genes were consistent with the growth and development phenotypes of the pea seedlings in the four treatment groups (Figure 6B; Figures 1A–G). On the other hand, the expression of genes in cluster 5 essentially remained unchanged under nSiO2 exposure, significantly increased under Cd toxicity, and significantly decreased under the Cd+nSiO2 interactive treatment (compared with that under Cd toxicity alone) (Figure 6B). The expression trends of these genes were opposite those of the growth and development phenotypes of the pea seedlings in the four treatment groups (Figure 6B; Figures 1A–G).

Figure 6
Heatmaps and line graphs displaying data on gene expression clusters under different conditions: Control, nSiO₂, Cd, and Cd+nSiO₂. Heatmaps (A, C) show z-score variations across clusters C1 to C6, with corresponding color gradients. Line graphs (B) illustrate normalized expression for six clusters, highlighting trends in expression changes across the conditions with varying membership intensities depicted in red to light blue gradients.

Figure 6. Perform cluster analysis on DEGs identified in the samples of four groups of pea seedlings under different treatments. Cluster analysis was performed on four groups of DEGs identified under different treatments in pea (A) roots and (C) leaves. (B) Analysis of gene expression trend under different treatments in gene clusters in pea seedlings roots.

On the other hand, we used the K-means algorithm to perform cluster analysis on 3530 DEGs identified from pea seedling leaf samples in the four treatment groups. The clustering results revealed that these DEGs were clustered into 6 gene clusters (Figure 6C). The number of DEGs in cluster 1, cluster 2, cluster 3, cluster 4, cluster 5 and cluster 6 in the leaves of pea seedlings was 616, 812, 670, 536, 651 and 245, respectively (Figure 6C). As shown in Supplementary Figure S4, Cd toxicity significantly induced gene expression in cluster 1, cluster 3, cluster 4 and cluster 6 pea leaves. In contrast, Cd toxicity significantly inhibited gene expression in cluster 2 and cluster 5 (Supplementary Figure S4). Further analysis revealed that the expression of genes in clusters 2 and 5 significantly decreased under nSiO2 exposure, significantly decreased under Cd toxicity, and significantly increased under the Cd+nSiO2 interactive treatment (compared with that under Cd toxicity alone) (Supplementary Figure S4). The change trend of DEG expression was similar to the change trend of the growth and development phenotypes of pea seedlings in the four treatment groups (Supplementary Figure S4; Figures 1A–G). In contrast, the expression of genes in cluster 3 and cluster 4 increased under nSiO2 exposure, significantly increased under Cd toxicity, and significantly decreased under the Cd+nSiO2 interactive treatment (compared with that under Cd toxicity alone) (Supplementary Figure S4). The change trend of DEG expression contrasted with the change trend of the growth and development phenotypes of pea seedlings in each treatment group (Supplementary Figure S4; Figures 1A–G).

3.10 KEGG enrichment analysis of DEGs in pea seedlings subjected to Cd toxicity and nSiO2

On the basis of the above results, KEGG enrichment analysis was performed on 268 DEGs from cluster 4 in pea seedling roots (Figure 6C; Figure 7A). The results revealed that the DEGs in root cluster 4 were significantly enriched in alanine, aspartate and glutamate metabolism; arginine biosynthesis; the phenylpropanoid biosynthesis pathway; etc. (Figure 7A). The 203 DEGs in cluster 5 of pea seedling roots were significantly enriched in starch and sucrose metabolism, carotenoid biosynthesis, nitrogen metabolism, arginine biosynthesis and other pathways (Figure 7B). On the other hand, KEGG enrichment analysis was performed on 670 DEGs from cluster 3 in pea seedling leaves (Supplementary Figure S4; Supplementary Figure S5A). The results revealed that DEGs in leaf cluster 3 of pea seedlings were significantly enriched in the biosynthesis of amino acids, starch and sucrose metabolism, fatty acid metabolism, and the flavonoid biosynthesis pathway (Supplementary Figure S5A). The 536 DEGs in cluster 4 of pea seedling leaves were significantly enriched in phenylpropanoid biosynthesis, starch and sucrose metabolism, amino acid biosynthesis, endocytosis and other pathways (Supplementary Figure S5B).

Figure 7
Two bubble charts display statistics of pathway enrichment. Chart A highlights pathways like “Arginine biosynthesis” and “Nitrogen metabolism,” with size indicating count and color showing q-value. Chart B features “Phenylpropanoid biosynthesis” and “Fatty acid degradation,” also using bubble size and color to represent count and q-value, respectively.

Figure 7. KEGG enrichment analysis of the differentially expressed genes in pea seedlings. Top 20 enriched KEGG pathways of DEGs from (A) cluster 4 and (B) cluster 5 in pea seedling roots.

Further analysis revealed that the LOC127094975 and LOC127093608 genes were enriched in the alanine, aspartate and glutamate metabolism pathways in pea seedling root cluster 4. These proteins play important regulatory roles in the conversion of L-glutamate to L-glutamine (Figure 8A). The heatmap shows that the expression of these genes is reduced under Cd stress, thus inhibiting this metabolic process. However, the expression of these genes in the roots of peas increased after exposure to nSiO2 under Cd stress (Figure 8A). The expression trends of these genes were consistent with the growth and development phenotypes of the pea seedlings in the four treatment groups (Figure 8A; Figures 1A–G). In root cluster 5 of pea seedlings, two genes, LOC127126644 and LOC127125929, were significantly enriched in the alanine, aspartate and glutamate metabolism pathways (Figure 8B). They play crucial roles in regulating the conversion of 2-oxoglutamate to L-glutamate. The heatmap clearly shows that the expression levels of these genes increase under Cd stress, thereby facilitating this metabolic process. Conversely, exposure to nSiO2 under Cd stress led to a decrease in the expression levels of these genes in pea roots (Figure 8B). The pattern of gene expression changes contrasted with the trend of growth and developmental phenotypic changes in pea seedlings under the four treatments (Figure 8B; Figures 1A–G).

Figure 8
Diagrams A, B, and C depict biochemical pathways with heat maps. A shows L-Glutamate to L-Glutamine conversion, with a heat map indicating gene expression levels across different treatments. B illustrates the conversion of 2-Oxo glutarate to L-Glutamate, also featuring gene expression data. C details a carbohydrate metabolism pathway, showing transformations from Sucrose-6P to Starch Glycogen, labeled with enzyme codes. The heat maps represent relative gene expression changes, using a color scale from blue (downregulation) to red (upregulation).

Figure 8. Metabolic pathway analysis of DEGs enrichment in the roots and leaves of pea seedlings. (A) Alanine, aspartate and glutamate metabolism pathways analysis in pea seedling root cluster 4. (B) Alanine, aspartate and glutamate metabolism pathways analysis in pea seedling root cluster 5. (C) Starch and sucrose metabolism pathways analysis in pea seedling leaf cluster 3.

On the basis of these previous results, KEGG enrichment analysis was performed on 670 DEGs from Cluster 3 in the leaves of pea seedlings (Supplementary Figure S4A). The results revealed that the DEGs in cluster 3 of pea seedling roots were significantly enriched in the ribosome, biosynthesis of amino acids, anthocyanin biosynthesis, starch and sucrose metabolism, flavonoid biosynthesis and other pathways (Supplementary Figure S4A). A total of 536 DEGs from cluster 4 pea seedling leaves were significantly enriched in glutathione metabolism, phenylpropanoid biosynthesis, starch and sucrose metabolism, and the endocytosis pathway (Supplementary Figure S4B).

Further analysis revealed that the genes enriched in the starch and sucrose metabolism pathways in leaf cluster 3 of pea seedlings were as follows: LOC127076145, LOC127108237, LOC127081761, LOC127118385, LOC127119689, LOC127132519, LOC127127306, LOC127128158, LOC127128624, LOC127076688, LOC127082706, LOC127085359, LOC127080507, LOC127083424, LOC127084279, LOC127091213, LOC127096584, LOC127108448, LOC127 106106, LOC127106154 and LOC127108192 (Figure 8C). These genes encode granule-bound starch synthase 1, B-S glucosidase 44, alpha-glucan phosphorylase 2, O-glycosyl hydrolase family 17 protein, fructokinase-like 2, metal ion-binding protein, endo-beta-mannase 5, O-glycosyl hydrolase family 17 protein, alpha-amylase-like 3,6-fructan exohydrolase, O-glycosyl hydrolase family 17 protein, APL4, disproportionate enzyme, glycosyl hydrolase 9B13, sucrose synthase 6, glycosyl hydrolase 9B13, carbohydrate-binding X8 domain superfamily protein, isoamylase 1, alpha-glucan phosphorylase 1, plasasmaodesmata callose-binding protein 5, and reduced beta amylase 1, respectively. These genes regulate the conversion pathway of sucrose to fructose and glucose (Figure 8C). The expression of these genes increased under Cd stress, thus promoting this metabolic process. Under Cd stress, nSiO2 exposure decreased the expression levels of these genes in pea leaves. The expression trend of these genes was opposite to that of the growth and development phenotypes of pea seedlings in the four groups (Figure 8C; Figures 1A–G).

4 Discussion

Cd, a nonessential element in organisms, exhibits strong biological toxicity and high environmental migration characteristics, facilitating its absorption and accumulation by crops (Franić and Galić, 2019; Shaari et al., 2022; Sterckeman and Thomine, 2020; Hussain et al., 2021). The excessive presence of Cd in plants leads to oxidative stress and membrane lipid peroxidation, disrupts photosynthetic functions, and diminishes photosynthesis, ultimately impeding plant growth and reducing biomass (Zhao et al., 2021; Benavides et al., 2005). Adsorption is widely regarded as a highly promising technology for mitigating environmental pollutants, offering significant advantages such as cost-effectiveness, operational simplicity, and low energy consumption. Among various adsorbents, porous nanomaterials have shown exceptional performance and play an important role in the removal of contaminants such as heavy metals (Ye et al., 2023). Furthermore, Pu et al. (2019) investigated the effect of copper oxide nanoparticles (nCuO) on copper uptake in maize and observed that nCuO could supplement copper nutrition in plants. De Sousa et al. (2019) demonstrated that nSiO2 can ameliorate the phytotoxic effects of Al in maize cultivated in acidic soil. This suggests that metal oxide nanoparticles are capable of dissociating to some extent, releasing metal ions. Previous studies have indicated that the uptake of mineral elements in plants involves competition among metal ions for transport via metal ion channel proteins (Inglezakis et al., 2005). Therefore, metal oxide nanoparticles may inhibit the uptake of heavy metals in plants through a competitive mechanism mediated by the ions they release.

Our study demonstrated that exposure to nSiO2 effectively mitigated the oxidative damage induced by Cd toxicity (Figure 2), attenuated its adverse impact on photosynthetic efficiency (Figure 3), enhanced mineral nutrient uptake under Cd stress (Figure 4), and promoted pea growth (Figure 1). Research has shown that Cd stress adversely affects plant height, leaf area, and biomass in Indian mustard and saffron seedlings (Jiang et al., 2004; Zhao et al., 2021). Furthermore, nSiO2 promotes plant growth, enhances development, and increases plant stress resistance. Studies have shown that nSiO2 alleviates seed germination under heavy metal stress. For example, Sun et al. (2023) revealed that nSiO2 significantly mitigated the inhibitory effects of Cd toxicity on Momordica balsam seedling growth. Additionally, nSiO2 reduces Cd absorption, modulates nutrient balance, and regulates the antioxidant enzyme system in barley seedlings under Cd stress (He et al., 2023). Emamverdian et al. (2020) reported that in the presence of heavy metals (Cu and Mn), nSiO2 enhanced protective enzyme activity, chlorophyll content, and photosynthetic efficiency, leading to increased biomass, stem length, and overall plant growth while reducing Cu and Mn toxicity. Our experiment also revealed that nSiO2 significantly improved the pea seed germination rate and potential under Cd stress, highlighting its ability to alleviate Cd toxicity during pea seed germination (Figure 1), possibly through mechanisms akin to those described by Emamverdian et al. (2020).

When plants undergo stress, the levels of ROS in their systems increase rapidly. The excessive presence of O2¯ and H2O2 results in oxidative stress, damaging plant membranes. SOD, POD, CAT, and other antioxidant enzymes play critical roles in the antioxidant defense system of plants. In response to stress, the activities of SOD, POD, and CAT increase to efficiently eliminate ROS and maintain normal metabolic equilibrium. Leng et al. (2021) reported that Cd significantly increased the activity of APX and CAT in the roots and stems of mung bean seedlings. On the other hand, Dong et al. (2016) reported that peanuts have the ability to mitigate Cd toxicity by increasing the activities of antioxidant enzymes (POD and CAT). Additionally, they reported a positive relationship between the Cd concentration and enzyme activity. Moreover, it increased POD activity in the roots, stems, and leaves while increasing the levels of leaf chlorophyll, carotenoids, root polyphenols, MDA, and proline. Conversely, the activity of CAT in leaves, the levels of AsA in roots and leaves, and the levels of polyphenols in stems and leaves decreased. Similarly, Perilla seedlings exposed to Cd stress presented elevated levels of O2¯ and MDA and increased antioxidant enzyme activity, in addition to reduced biomass and root dry weight (Wang et al., 2022). This study of pea seedlings subjected to Cd stress revealed notable increases in ROS (O2¯, H2O2) and MDA contents, accompanied by increased activities of antioxidant enzymes (SOD, POD, and CAT). Consequently, reduced membrane lipid peroxidation hinders root function, leading to inhibited plant growth (Figure 1; Figure 2; Supplementary Figure S1). However, when the pea seedlings were exposed to nSiO2 under Cd stress, the activities of the antioxidant enzymes SOD, POD, and CAT decreased, as did the levels of O2¯, H2O2, and MDA (Figure 1; Figure 2; Supplementary Figure S1). These results indicate that nSiO2 can mitigate the oxidative stress induced by Cd toxicity, thereby alleviating its inhibitory impact on the growth of pea seedlings.

The accumulation of Cd in roots caused significant phytotoxicity in plants. Studies by Muhammad Arshad et al. (2016) have demonstrated that Cd stress inhibits gas exchange in wheat seedlings, exacerbating the connection between photosynthesis and gas exchange. Additionally, Cd triggers the degradation of chlorophyll, resulting in a loss of photosynthetic pigments (Sun et al., 2023). Disruption of PSII by Cd leads to a decrease in initial fluorescence (F0) and Fv/Fm in Solanum leaves (Gharbi et al., 2018). Janeeshma et al. (2021) reported that Cd stress significantly impacts early photochemical reactions in maize. Research has also revealed that the nonspecific toxic effects of Cd cause chlorophyll degradation, decrease the efficiency of PSII, and interfere with electron transport processes. Farhat et al. (2022) reported notable reductions in the Fv/Fm, qP, electron transport rate (ETR), and gas exchange properties of wheat under Cd stress. They also noted that Cd-induced plant toxicity increased nonphotochemical quenching (NPQ) and the internal carbon dioxide concentration (Ci). Our study focused on the chlorophyll fluorescence parameters of pea seedlings under Cd stress and revealed a decrease in the photochemical quenching coefficient of the leaves, the Fv/Fm of PSII, and the Pn and Tr (Figure 3). These findings imply that Cd inhibits photosynthetic efficiency by suppressing photochemical reactions. The inhibition of photosynthetic characteristics by Cd, such as reduced chlorophyll content, impaired photochemical reactions, gas exchange, and transpiration rates, is widely recognized as the primary cause of plant growth inhibition (Aqeel et al., 2021). Interestingly, the application of nSiO2 to pea seedlings under Cd toxicity resulted in a decrease in the photochemical quenching coefficient of the leaves but increased the Fv/Fm, Pn and Tr of the seedling leaves (Figure 3). These results suggest that nSiO2 can alleviate the inhibitory effects of Cd toxicity on pea seedling growth by restoring photochemical reactions.

The absorption of nutrients in plants is hampered by Cd due to the lack of a specific transporter for Cd in plants. As a result, Cd competes with essential cations such as Ca2+, Cu2+, Zn2+, and Mg2+ for transmembrane transport (Pinto and Ferreira, 2015), leading to an imbalance of mineral elements within plants. Magnesium plays a pivotal role as a central metal element with chelating effects at the core of the chlorophyll porphyrin ring, and its deficiency can negatively impact chlorophyll synthesis in plants (Hansson et al., 2013). Copper is predominantly found in chloroplasts, and a deficiency in copper can disrupt the stability of chlorophyll in leaves. Zinc acts as a catalyst during chlorophyll synthesis, and its deficiency can reduce the transpiration rate and stress resistance of plants (Rodríguez et al., 2018). Iron not only aids in chlorophyll synthesis but also supports photosynthesis and respiration processes as a cofactor for various functional proteins in plants. Within photosystem I, iron combines with sulfur to form ferrithioreducin, which actively participates in electron transport (Sticht and Rösch, 1998). Our investigation revealed that Cd toxicity significantly hindered the uptake of Mg, Cu, and Zn in both the roots and leaves of pea (Figures 4C–E; Supplementary Figure S2). This disruption in elemental balance leads to compromised chlorophyll synthesis and stability, damage to the chloroplast structure, interference with the Q cycle, and accumulation in the initial reaction of PSII, ultimately inhibiting plant photosynthesis (de Bang et al., 2021). Notably, the application of nSiO2 pea seedlings under Cd toxicity promoted the absorption of Mg, Cu, and Zn. Consequently, nSiO2 alleviated the inhibitory effects of Cd on pea photosynthesis efficiency (Figures 4C–E; Figure 3). These results indicate the potential of nSiO2 to increase pea photosynthesis efficiency and alleviate Cd-induced growth inhibition by facilitating the absorption of mineral elements.

Our previous research revealed that Cd toxicity inhibits the growth of tomato seedlings by disrupting metabolic pathways involving arginine, proline, alanine, aspartic acid, and glutamic acid (Sun et al., 2023). Phenylalanine and tyrosine play a role in the synthesis of cinnamic acid and its hydroxyl derivatives (Jitareanu et al., 2011), which act as precursors for lignin production, polyphenols, and their derivatives while also regulating various physiological processes in plants (Shuab et al., 2016). In this study, six clusters of DEGs were identified from pea seedling roots and leaves through clustering analysis. KEGG enrichment analysis was subsequently conducted to identify prominent Cd-responsive metabolic regulatory pathways (Figure 6; Figure 7; Supplementary Figure S4). Notably, the gene expression changes in pea seedling root cluster 4 were consistent with the growth and development phenotypes of pea seedlings under different treatments, whereas the changes in cluster 5 were inversely related to the growth and development phenotypes under the four treatments (Figure 6B; Figures 1A–G). In the alanine, aspartate, and glutamate metabolism pathway (Root Cluster 4), LOC127094975 and LOC127093608 play crucial roles in the conversion of L-glutamate to L-glutamine. Their downregulation under Cd stress and recovery under nSiO2 + Cd treatment correlate with restored growth phenotypes (Figure 8A). Cd toxicity led to the suppression of LOC127093608 expression, causing the accumulation of L-glutamate. Conversely, the genes LOC127126644 and LOC127125929 were enriched in the same pathway within cluster 5 of pea seedling roots, with a significant role in the conversion of 2-oxoglutarate to L-glutamate (Figure 8B). Cd toxicity resulted in the upregulation of LOC127126644 expression, leading to the accumulation of L-glutamate. These findings suggest that the accumulation of L-glutamate, regulated by the genes LOC127094975, LOC127093608, LOC127126644, and LOC127125929, plays a pivotal role in the response of peas to Cd toxicity. Under Cd-induced stress, exposure to nSiO2 influenced the expression levels of these genes in pea roots (Figures 8A, B), indicating their potential as candidate genes for the nSiO2-mediated response to Cd stress in peas.

Under Cd stress, plant cells actively participate in the perception of Cd and subsequent response mechanisms by activating defence-related genes through pathways such as calcium signaling and phytohormone signaling (Al-Khayri et al., 2023). The interdependent metabolic and transport processes of carbon (C) and nitrogen (N) play a regulatory role in plant growth, development, and stress responses. Yin et al. (2024) found that the negative impact of Cd stress on defense gene expression and metabolic profiles in Salix viminalis was counteracted by melatonin, which restored homeostasis in leaf amino acid and carbohydrate metabolic pathways. In rice, the transcription factor Nhd1 modulates these processes by directly activating the expression of OsSUT1 (sucrose transporter 1), which in turn leads to extensive reprogramming of gene expression involved in starch, sucrose, and amino acid metabolic pathways (Li et al., 2023). The metabolism of sucrose is crucial for plant growth and development, as it not only serves as an energy source and a structural component but also functions as an antioxidant to increase plant resilience against external stresses (Granot et al., 2013). Yokotani et al. (2009) demonstrated that the transcription factor ONAC063 in rice can upregulate salt stress response genes and the amylase gene AMY1 in Arabidopsis, indicating its regulatory role in salt stress. In starch and sucrose metabolism (Leaf Cluster 3), we identified genes such as LOC127076145 (granule-bound starch synthase 1) and LOC127128624 (amylase-like protein), which are involved in starch degradation and sucrose conversion. Their expression patterns under different treatments are explicitly linked to carbon allocation and energy supply under stress. Notably, LOC127128624 plays a significant role in the Cd stress response in pea plants (Figure 8C). Furthermore, Zhai et al. (2021) reported that ectopic expression of OLEOSIN 1 and inactivation of the starch synthase gene GBSS1 had synergistic effects on lipid accumulation in plant leaves. Here, we found that the LOC127076145 gene in pea leaves encodes granule-bound starch synthase 1, which is highly expressed under Cd stress (Figure 8C), indicating a potential increase in starch accumulation in response to Cd toxicity. Additionally, we observed that the Cd stress response gene LOC127081761 in peas facilitates the conversion of starch glycogen to cellulose (Figure 8C), suggesting that it plays a role in enhancing plant Cd tolerance by regulating cell wall formation. Transcriptome analysis revealed opposite expression patterns of these DEGs in peas under the Cd+nSiO2 interaction treatment compared with those under Cd toxicity alone (Figure 8C), indicating that these DEGs could be candidate genes for the nSiO2-mediated Cd stress response in peas. However, further exploration is needed to understand the functions and regulatory mechanisms of these DEGs.

In this study, we investigated the physiological and molecular mechanisms underlying nSiO2-induced alleviation of Cd toxicity in pea seedlings by evaluating growth parameters, oxidative stress, photosynthetic efficiency, mineral nutrient uptake, and transcriptomic profiles. Our integrated data provide compelling indirect evidence that nSiO2 application reduces Cd uptake and alleviates its phytotoxicity, likely through mechanisms such as surface complexation, ion exchange, or co-precipitation—consistent with previous reports (Cui et al., 2017; Sun et al., 2023). The decreased Cd accumulation in roots and leaves following nSiO2 treatment (Figure 4A) further supports the presence of adsorption-based interactions between nSiO2 and Cd ions. Prior studies have confirmed that nanoparticles can bind Cd²+ via surface complexation and ion exchange (Cui et al., 2017; Rizwan et al., 2019), thereby reducing metal bioavailability. Beyond adsorption, our transcriptomic analysis revealed that nSiO2 modulates pivotal metabolic pathways in pea plants, especially in sucrose and amino acid metabolism, enhancing internal detoxification capability. These findings expand the current mechanistic understanding of nanoparticle-mediated mitigation of Cd stress. Furthermore, in contrast to monocot species such as rice and maize, legumes exhibit distinct regulatory responses in nutrient metabolism, underscoring the importance of species-specific mechanisms in nanoparticle-assisted phytoremediation. Our results highlight the dual role of nSiO2 in not only adsorbing heavy metal ions but also reprogramming physiological processes, supporting its potential application in sustainable agriculture within contaminated environments.

Notwithstanding these insights, the current study acknowledges certain limitations. The contribution of adsorption mechanisms to nSiO2-mediated Cd mitigation remains incompletely characterized and warrants further investigation. While our study demonstrates nSiO2-mediated reduction in Cd uptake through physiological and transcriptomic evidence, future incorporation of adsorption models such as Langmuir and Freundlich isotherms could quantitatively characterize binding capacity and affinity between nSiO2 and Cd²+. Such modeling would provide crucial parameters to complement the molecular mechanisms identified here and further bridge nanoparticle surface interactions with plant physiological responses. Future studies should therefore employ dedicated adsorption experiments, including time-dependent kinetic assays and equilibrium isotherm analyses, complemented by robust statistical validation, to rigorously quantify nSiO2 adsorption behavior. Established models in adsorption science—such as Langmuir, Freundlich, and pseudo-second-order kinetics—provide standardized frameworks for quantifying adsorption capacity and dynamics. Applying these modeling approaches will enable systematic characterization of nSiO2–Cd²+ interactions, allow direct comparisons with other nano-agricultural systems, and yield deeper mechanistic insights into the adsorption process.

5 Conclusion

Cd is one of the most toxic heavy metals to organisms, and its pollution poses a threat to the sustainable development of agriculture and food safety (Godt et al., 2006; Kaur et al., 2018). This study investigated the impact of nSiO2 on pea growth under Cd-induced stress. Exposure to nSiO2 enhances pea seedling resistance to oxidative stress, increases mineral element accumulation, and improves photosynthetic efficiency, consequently fostering pea seedling growth under Cd stress. Analysis at the transcriptomic level revealed that nSiO2 altered C/N metabolic pathways, particularly sucrose and amino acid metabolism, in pea seedlings. Furthermore, the expression profiles of DEGs associated with these metabolic pathways were significantly correlated with plant growth and development. Nevertheless, certain limitations should be considered in this study. The experiments were conducted under controlled hydroponic conditions, which may not fully reflect the complex soil-plant interactions occurring in natural field environments. Factors such as soil organic matter, microbial activity, and variable climatic conditions could significantly influence the efficacy and behavior of nSiO2 in practical applications. The current study lacks detailed adsorption kinetics and isotherm models to quantitatively describe the interaction between nSiO2 and Cd, as well as incomplete characterization of nanoparticle transformations under physiological conditions. It should be emphasized that adsorption kinetic and isotherm models (e.g., Langmuir and Freundlich) represent well-established methodologies in nanomaterial–metal interaction studies. Their application in future investigations would provide essential quantitative parameters for assessing nSiO2–Cd binding efficiency and facilitate the predictive accuracy required for scaling up nano-enabled agricultural strategies.

Future research should focus on the following key areas: (1)time-resolved adsorption experiments, surface complexation modeling, and long-term stability assessments of silica nanoparticles within the soil-plant system; (2) long-term toxicity studies to evaluate the persistence and potential ecological impacts of nSiO2 in agricultural systems; (3) well-designed field trials to validate the effectiveness of nSiO2-assisted phytoremediation under realistic growing conditions; and (4) further investigation into the molecular mechanisms underlying nSiO2-mediated Cd sequestration and transport, particularly the roles of specific genes and metabolic pathways identified in this study. From a practical perspective, nSiO2-assisted phytoremediation demonstrates promising scalability for real-world application in contaminated farmland. However, several challenges must be addressed before widespread implementation, including the assessment of economic feasibility and comprehensive environmental risks. Despite these challenges, our findings provide valuable insights into the potential of nanotechnology-based approaches for sustainable agriculture and environmental remediation, offering a theoretical foundation for the further development of nanoparticle-assisted phytoremediation strategies.

Data availability statement

The datasets presented in this study can be found in online repositories. The names of the repository/repositories and accession number(s) can be found below: https://www.ncbi.nlm.nih.gov/, PRJNA1272468.

Author contributions

XY: Conceptualization, Data curation, Methodology, Visualization, Writing – original draft. WZ: Formal Analysis, Funding acquisition, Methodology, Project administration, Writing – original draft. HL: Data curation, Formal Analysis, Visualization, Writing – original draft. LinS: Data curation, Formal Analysis, Validation, Writing – original draft. LW: Methodology, Validation, Writing – original draft. ZW: Data curation, Validation, Writing – original draft. JY: Formal Analysis, Visualization, Writing – original draft. BZ: Funding acquisition, Supervision, Writing – review & editing. LZ: Data curation, Visualization, Writing – review & editing. XZ: Data curation, Validation, Writing – review & editing. LiaS: Funding acquisition, Project administration, Writing – review & editing. JM: Conceptualization, Project administration, Resources, Writing – original draft, Writing – review & editing.

Funding

The author(s) declare financial support was received for the research and/or publication of this article. This work was jointly supported by grants from the Agricultural Basic Research Joint Program of Yunnan Province (202401BD070001-057), the Innovation Guidance and Technology-based Enterprise Cultivation Program of Yunnan Province (202404BU090028), the Construction of Science and Technology Innovation Center for South Asia and Southeast Asia - International Joint Innovation Platform of Yunnan Province (202403AP140018), the Scientific Research Staring Foundation of College of Tropical Crop, Yunnan Agricultural University (2023YNAU2023089), the Expert Grassroots Scientific Research Workstation Project of Yunnan Province (2021RYZJGZZ004), and the Border Village Science and Technology Task Force of Yunnan Province (202304BI090032).

Conflict of interest

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Generative AI statement

The author(s) declare that no Generative AI was used in the creation of this manuscript.

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Supplementary material

The Supplementary Material for this article can be found online at: https://www.frontiersin.org/articles/10.3389/fpls.2025.1641785/full#supplementary-material

References

Ahmed, T., Masood, H. A., Noman, M., Al-Huqail, A. A., Alghanem, S. M., Khan, M. M., et al. (2023). Biogenic silicon nanoparticles mitigate cadmium (Cd) toxicity in rapeseed (Brassica napus L.) by modulating the cellular oxidative stress metabolism and reducing Cd translocation. J. Hazard Mater. 459, 132070. doi: 10.1016/j.jhazmat.2023.132070

PubMed Abstract | Crossref Full Text | Google Scholar

Akpomie, K. G., Conradie, J., Adegoke, K. A., Oyedotun, K. O., Ighalo, J. O., Amaku, J. F., et al. (2023). Adsorption mechanism and modeling of radionuclides and heavy metals onto ZnO nanoparticles: a review. Appl. Water Sci. 13, 20. doi: 10.1007/s13201-022-01827-9

Crossref Full Text | Google Scholar

Al-Khayri, J. M., Banadka, A., Rashmi, R., Nagella, P., Alessa, F. M., and Almaghasla, M. I. (2023). Cadmium toxicity in medicinal plants: An overview of the tolerance strategies, biotechnological and omics approaches to alleviate metal stress. Front. Plant Sci. 13, 1047410. doi: 10.3389/fpls.2022.1047410

PubMed Abstract | Crossref Full Text | Google Scholar

Anwar, T., Qureshi, H., Kabir, T., Ahmad, Z., Siddiqi, E. H., Ullah, N., et al. (2025). Mitigating cadmium toxicity in maize through silicon nanoparticles: effects on growth, antioxidant activity and metal accumulation. Silicon. 17, 2347–2356. doi: 10.1007/s12633-025-03317-4

Crossref Full Text | Google Scholar

Aqeel, M., Khalid, N., Tufail, A., Ahmad, R. Z., Akhter, M. S., Luqman, M., et al. (2021). Elucidating the distinct interactive impact of cadmium and nickel on growth, photosynthesis, metal- homeostasis, and yield responses of mung bean (Vigna radiata L.) varieties. Environ. Sci. pollut. R. 28, 27376–27390. doi: 10.1007/s11356-021-12579-5

PubMed Abstract | Crossref Full Text | Google Scholar

Asare, M. O., Száková, J., and Tlustoš, P. (2023). The fate of secondary metabolites in plants growing on Cd-, As-, and Pb-contaminated soils-a comprehensive review. Environ. Sci. pollut. R. 30, 11378–11398. doi: 10.1007/s11356-022-24776-x

PubMed Abstract | Crossref Full Text | Google Scholar

Aslam, M. M., Okal, E. J., and Waseem, M. (2023). Cadmium toxicity impacts plant growth and plant remediation strategies. Plant Growth Regul. 99, 397–412. doi: 10.1007/s10725-022-00917-7

Crossref Full Text | Google Scholar

Barclay, K. D. and McKersie, B. D. (1994). Peroxidation reactions in plant membranes: effects of free fatty acids. Lipids 29, 877–882. doi: 10.1007/BF02536256

PubMed Abstract | Crossref Full Text | Google Scholar

Benavides, M. P., Gallego, S. M., and Tomaro, M. L. (2005). Cadmium toxicity in plants. Braz. J. Plant Physiol. 17, 21–34. doi: 10.1590/S1677-04202005000100003

Crossref Full Text | Google Scholar

Chen, J., Chen, X., Zhang, Q., Zhang, Y., Ou, X., An, L., et al. (2018). A cold-induced pectin methyl- esterase inhibitor gene contributes negatively to freezing tolerance but positively to salt tolerance in Arabidopsis. J. Plant Physiol. 222, 67–78. doi: 10.1016/j.jplph.2018.01.003

PubMed Abstract | Crossref Full Text | Google Scholar

Cui, J., Liu, T., Li, F., Yi, J., Liu, C., and Yu, H. (2017). Silica nanoparticles alleviate cadmium toxicity in rice cells: Mechanisms and size effects. Environ. pollut. 228, 363–369. doi: 10.1016/j.envpol.2017.05.014

PubMed Abstract | Crossref Full Text | Google Scholar

de Bang, T. C., Husted, S., Laursen, K. H., Persson, D. P., and Schjoerring, J. K. (2021). The molecular–physiological functions of mineral macronutrients and their consequences for deficiency symptoms in plants. New Phytol. 229, 2446–2469. doi: 10.1111/nph.17074

PubMed Abstract | Crossref Full Text | Google Scholar

De Sousa, A., Saleh, A. M., Habeeb, T. H., Hassan, Y. M., Zrieq, R., Wadaan, M. A., et al. (2019). Silicon dioxide nanoparticles ameliorate the phytotoxic hazards of aluminum in maize grown on acidic soil. Sci. Total Environ. 693, 133636. doi: 10.1016/j.scitotenv.2019.133636

PubMed Abstract | Crossref Full Text | Google Scholar

Dong, Y., Chen, W., Xu, L., Kong, J., Liu, S., and He, Z. (2016). Nitric oxide can induce tolerance to oxidative stress of peanut seedlings under cadmium toxicity. Plant Growth Regul. 79, 19–28. doi: 10.1007/s10725-015-0105-3

Crossref Full Text | Google Scholar

Emamverdian, A., Ding, Y., Mokhberdoran, F., Ahmad, Z., and Xie, Y. (2020). Determination of heavy metal tolerance threshold in a bamboo species (Arundinaria pygmaea) as treated with silicon dioxide nanoparticles. Glob. Ecol. Conserv. 24, e01306. doi: 10.1016/j.gecco.2020.e01306

Crossref Full Text | Google Scholar

Farhat, F., Arfan, M., Wang, X., Tariq, A., Kamran, M., Tabassum, H. N., et al. (2022). The impact of bio-stimulants on Cd-stressed wheat (Triticum aestivum L.): Insights into growth, chlorophyll fluorescence, Cd accumulation, and osmolyte regulation. Front. Plant Sci. 13, 850567. doi: 10.3389/fpls.2022.850567

PubMed Abstract | Crossref Full Text | Google Scholar

Franić, M. and Galić, V. (2019). “As, Cd, Cr, Cu, Hg: Physiological implications and toxicity in plants,” in Plant Metallomics and Functional Omics: A System-Wide Perspective, (Cham: Springer International Publishing), 209–251.

Google Scholar

Gharbi, F., Zribi, L., Daly, A. B., Rejeb, S., and Hanchi, B. (2018). Photosynthetic responses of tomato leaves to salt and cadmium stresses: growth and chlorophyll a fluorescence kinetic analyses. Pol. J. Environ. Stud. 27, 1–10. doi: 10.15244/pjoes/81066

Crossref Full Text | Google Scholar

Ghosh, D., Das, S., Gahlot, V. K., Pulimi, M., Anand, S., Chandrasekaran, N., et al. (2022). A comprehensive estimate of the aggregation and transport of nSiO2 in static and dynamic aqueous systems. Environ. Sci-Proc. Imp. 24, 675–688. doi: 10.1039/D2EM00016D

PubMed Abstract | Crossref Full Text | Google Scholar

Głowacka, K., Źróbek-Sokolnik, A., Okorski, A., and Najdzion, J. (2019). The effect of cadmium on the activity of stress-related enzymes and the ultrastructure of pea roots. Plants. 8, 413. doi: 10.3390/plants8100413

PubMed Abstract | Crossref Full Text | Google Scholar

Godt, J., Scheidig, F., Grosse-Siestrup, C., Esche, V., Brandenburg, P., Reich, A., et al. (2006). The toxicity of cadmium and resulting hazards for human health. J. Occup. Med. Toxicol. 1 (1), 22.

PubMed Abstract | Google Scholar

Gong, B., Li, X., Bloszies, S., Wen, D., Sun, S., Wei, M., et al. (2014). Sodic alkaline stress mitigation by interaction of nitric oxide and polyamines involves antioxidants and physiological strategies in Solanum lycopersicum. Free Radical. Bio. Med. 71, 36–48. doi: 10.1016/j.freeradbiomed.2014.02.018

PubMed Abstract | Crossref Full Text | Google Scholar

Granot, D., David-Schwartz, R., and Kelly, G. (2013). Hexose kinases and their role in sugar-sensing and plant development. Front. Plant Sci. 4, 44. doi: 10.3389/fpls.2013.00044

PubMed Abstract | Crossref Full Text | Google Scholar

Hansson, M., Lundqvist, J., Sirijovski, N., Al-Karadaghi, S., and Subunits, I. M. C. (2013). Magnesium chelatase: the molecular motor of chlorophyll biosynthesis. Handb. Porphyrin. Sci. 28, 41–84. doi: 10.1142/9789814407755_0019

Crossref Full Text | Google Scholar

He, S., Lian, X., Zhang, B., Liu, X., Yu, J., Gao, Y., et al. (2023). Nano silicon dioxide reduces cadmium uptake, regulates nutritional homeostasis and antioxidative enzyme system in barley seedlings (Hordeum vulgare L.) under cadmium stress. Environ. Sci. pollut. R. 30, 67552–67564. doi: 10.1007/s11356-023-27130-x

PubMed Abstract | Crossref Full Text | Google Scholar

Hussain, B., Umer, M. J., Li, J., Ma, Y., Abbas, Y., Ashraf, M. N., et al. (2021). Strategies for reducing cadmium accumulation in rice grains. J. Clean. Prod. 286, 125557. doi: 10.1016/j.jclepro.2020.125557

Crossref Full Text | Google Scholar

Inglezakis, V. J., Zorpas, A. A., Loizidou, M. D., and Grigoropoulou, H. P. (2005). The effect of competitive cations and anions on ion exchange of heavy metals. Sep. Purif. Technol. 46, 202–207. doi: 10.1016/j.seppur.2005.05.008

Crossref Full Text | Google Scholar

Janeeshma, E., Kalaji, H. M., and Puthur, J. T. (2021). Differential responses in the photosynthetic efficiency of Oryza sativa and Zea mays on exposure to Cd and Zn toxicity. Acta Physiol. Plant 43, 12. doi: 10.1007/s11738-020-03178-x

Crossref Full Text | Google Scholar

Jayakumar, M., Surendran, U., Raja, P., Kumar, A., and Senapathi, V. (2021). A review of heavy metals accumulation pathways, sources and management in soils. Arab. J. Geosci. 14, 2156. doi: 10.1007/s12517-021-08543-9

Crossref Full Text | Google Scholar

Jiang, X. J., Luo, Y. M., Liu, Q., Liu, S. L., and Zhao, Q. G. (2004). Effects of cadmium on nutrient uptake and translocation by Indian Mustard. Environ. Geochem. Hlth. 26, 319–324. doi: 10.1023/B:EGAH.0000039596.15586.b3

PubMed Abstract | Crossref Full Text | Google Scholar

Jitareanu, A., Tataringa, G., Zbancioc, A. M., and Stănescu, U. (2011). Toxicity of some cinnamic acid derivatives to common bea (Phaseolus vulgaris). Not. Bot. Horti. Agrobo. 39, 130–134. doi: 10.15835/nbha3927183

Crossref Full Text | Google Scholar

Kaur, R., Yadav, P., Thukral, A. K., Sharma, A., Bhardwaj, R., Alyemeni, M. N., et al. (2018). Castasterone and citric acid supplementation alleviates cadmium toxicity by modifying antioxidants and organic acids in Brassica juncea. J. Plant Growth Regul. 37 (1), 286–299.

Google Scholar

Kumar, A. and Aery, N. C. (2016). Impact, metabolism, and toxicity of heavy metals in plants. Plant responses to xenobiotics, 141–176. doi: 10.1007/978-981-10-2860-1_7

Crossref Full Text | Google Scholar

Leng, Y., Li, Y., Ma, Y. H., He, L. F., and Li, S. W. (2021). Abscisic acid modulates differential physiological and biochemical responses of roots, stems, and leaves in mung bean seedlings to cadmium stress. Environ. Sci. pollut. R. 28, 6030–6043. doi: 10.1007/s11356-020-10843-8

PubMed Abstract | Crossref Full Text | Google Scholar

Li, K., Tang, S., Zhang, S., Tian, Y., Qu, H., Gu, M., et al. (2023). Rice circadian clock regulator Nhd1 controls the expression of the sucrose transporter gene OsSUT1 and impacts carbon–nitrogen balance. J. Exp. Bot. 74, 1460–1474. doi: 10.1093/jxb/erac494

PubMed Abstract | Crossref Full Text | Google Scholar

Li, N., Zhu, F., Wang, Z., Wu, J., Gao, Y., Li, K., et al. (2025). Harnessing corn straw biochar: A breakthrough in eco-friendly Cu (II) wastewater treatment. Waste Manage. 197, 25–34. doi: 10.1016/j.wasman.2025.02.027

PubMed Abstract | Crossref Full Text | Google Scholar

Liu, F., Tang, R., Li, Q., Wang, H., Zou, Y., and Yuan, X. (2025). Improved thermal performance, frost resistance, and pore structure of cement–based composites by binary modification with mPCMs/nano–SiO2. Energy. 137166. doi: 10.1016/j.energy.2025.137166

Crossref Full Text | Google Scholar

Ma, J., Cai, H., He, C., Zhang, W., and Wang, L. (2015). A hemicellulose-bound form of silicon inhibits cadmium ion uptake in rice (Oryza sativa) cells. New Phytol. 206, 1063–1074. doi: 10.1111/nph.13276

PubMed Abstract | Crossref Full Text | Google Scholar

Muhammad Arshad, M. A., Shafaqat Ali, S. A., Ali Noman, A. N., Qasim Ali, Q. A., Muhammad Rizwan, M. R., Mujahid Farid, M. F., et al. (2016). Phosphorus amendment decreased cadmium (Cd) uptake and ameliorates chlorophyll contents, gas exchange attributes, antioxidants, and mineral nutrients in wheat (Triticum aestivum L.) under Cd stress. Arch. Agron. Soil Sci. 62, 533–546. doi: 10.1080/03650340.2015.1064903

Crossref Full Text | Google Scholar

Pinto, E. and Ferreira, I. M. (2015). Cation transporters/channels in plants: Tools for nutrient biofortification. J. Plant Physiol. 179, 64–82. doi: 10.1016/j.jplph.2015.02.010

PubMed Abstract | Crossref Full Text | Google Scholar

Pu, S., Yan, C., Huang, H., Liu, S., and Deng, D. (2019). Toxicity of nano-CuO particles to maize and microbial community largely depends on its bioavailable fractions. Environ. pollut. 255, 113248. doi: 10.1016/j.envpol.2019.113248

PubMed Abstract | Crossref Full Text | Google Scholar

Rahman, Z. and Singh, V. P. (2019). The relative impact of toxic heavy metals (THMs) (arsenic (As), cadmium (Cd), chromium (Cr) (VI), mercury (Hg), and lead (Pb)) on the total environment: an overview. Environ. Monit. Assess. 191, 419. doi: 10.1007/s10661-019-7528-7

PubMed Abstract | Crossref Full Text | Google Scholar

Rhimi, N., Hajji, M., Elkhouni, A., Ksiaa, M., Rabhi, M., Lefi, E., et al. (2024). Silicon reduces cadmium accumulation and improves growth and stomatal traits in sea barley (Hordeum marinum Huds.) exposed to cadmium stress. J. Soil Sci. Plant Nutt. 24, 2232–2248. doi: 10.1007/s42729-024-01689-x

Crossref Full Text | Google Scholar

Rizwan, M., Ali, S., ur Rehman, M. Z., Adrees, M., Arshad, M., Qayyum, M. F., et al. (2019). Alleviation of cadmium accumulation in maize (Zea mays L.) by foliar spray of zinc oxide nanoparticles and biochar to contaminated soil. Environ. pollut. 248, 358–367. doi: 10.1016/j.envpol.2019.02.031

PubMed Abstract | Crossref Full Text | Google Scholar

Rodríguez, F. E., Laporte, D., González, A., Mendez, K. N., Castro-Nallar, E., Meneses, C., et al. (2018). Copper-induced increased expression of genes involved in photosynthesis, carotenoid synthesis and C assimilation in the marine alga Ulva compressa. BMC Genomics 19, 829. doi: 10.1186/s12864-018-5226-4

PubMed Abstract | Crossref Full Text | Google Scholar

Sajid, M. and Płotka-Wasylka, J. (2020). Nanoparticles: Synthesis, characteristics, and applications in analytical and other sciences. Microchem. J. 154, 104623. doi: 10.1016/j.microc.2020.104623

Crossref Full Text | Google Scholar

Shaari, N. E. M., Tajudin, M. T. F. M., Khandaker, M. M., Majrashi, A., Alenazi, M. M., Abdullahi, U. A., et al. (2022). Cadmium toxicity symptoms and uptake mechanism in plants: a review. Braz. J. Biol. 84, e252143. doi: 10.1590/1519-6984.252143

PubMed Abstract | Crossref Full Text | Google Scholar

Shuab, R., Lone, R., and Koul, K. K. (2016). Cinnamate and cinnamate derivatives in plants. Acta Physiol. Plant 38, 64. doi: 10.1007/s11738-016-2076-z

Crossref Full Text | Google Scholar

Siddiqui, M. H., Al-Whaibi, M. H., Firoz, M., and Al-Khaishany, M. Y. (2015). Role of nanoparticles in plants. Nanotechnology and plant sciences: nanoparticles and their impact on plants. 19–35.

Google Scholar

Sterckeman, T. and Thomine, S. (2020). Mechanisms of cadmium accumulation in plants. Crit. Rev. Plant Sci. 39, 322–359. doi: 10.1080/07352689.2020.1792179

Crossref Full Text | Google Scholar

Sticht, H. and Rösch, P. (1998). The structure of iron–sulfur proteins. Prog. Biophys. Mol. Bio. 70, 95–136. doi: 10.1016/S0079-6107(98)00027-3

PubMed Abstract | Crossref Full Text | Google Scholar

Sun, L., Wang, R., Ju, Q., Xing, M., Li, R., Li, W., et al. (2023). Mitigation mechanism of zinc oxide nanoparticles on cadmium toxicity in tomato. Front. Plant Sci. 14, 1162372. doi: 10.3389/fpls.2023.1162372

PubMed Abstract | Crossref Full Text | Google Scholar

Sun, L., Wang, Y., Wang, R., Wang, R., Zhang, P., Ju, Q., et al. (2020). Physiological, transcriptomic, and metabolomic analyses reveal zinc oxide nanoparticles modulate plant growth in tomato. Environ. Sci-Nano 7, 3587–3604. doi: 10.1039/D0EN00723D

Crossref Full Text | Google Scholar

Waalkes, M. P. and Diwan, B. A. (1999). Cadmium-induced inhibition of the growth and metastasis of human lung carcinoma xenografts: role of apoptosis. Carcinogenesis 20, 65–70. doi: 10.1093/carcin/20.1.65

PubMed Abstract | Crossref Full Text | Google Scholar

Wang, R., Sun, L., Zhang, P., Wan, J., Wang, Y., and Xu, J. (2022). Zinc oxide nanoparticles alleviate cadmium stress by modulating plant metabolism and decreasing cadmium accumulation in Perilla frutescents. Plant Growth Regul. 100, 85–96. doi: 10.1007/s10725-022-00938-2

Crossref Full Text | Google Scholar

Xu, J., Li, Y. L., Sun, J. H., Du, L., Zhang, Y., Yu, Q., et al. (2013). Comparative physiological and proteomic response to abrupt low temperature stress between two winter wheat cultivars differing in low temperature tolerance. Plant Biol. 15, 292–303. doi: 10.1111/j.1438-8677.2012.00639.x

PubMed Abstract | Crossref Full Text | Google Scholar

Ye, Q., Chen, Y., Li, Y., Jin, R., Geng, Q., and Chen, S. (2023). Management of typical VOCs in air with adsorbents: status and challenges. Dalton T. 52, 12169–12184. doi: 10.1039/D3DT01930F

PubMed Abstract | Crossref Full Text | Google Scholar

Yin, J., Li, A., Wang, Y., Li, X., Ning, W., Zhou, X., et al. (2024). Melatonin improves cadmium tolerance in Salix viminalis by enhancing amino acid and saccharide metabolism, and increasing polyphenols. Ecotox. Environ. Safe. 288, 117393. doi: 10.1016/j.ecoenv.2024.117393

PubMed Abstract | Crossref Full Text | Google Scholar

Yokotani, N., Ichikawa, T., Kondou, Y., Matsui, M., Hirochika, H., Iwabuchi, M., et al. (2009). Tolerance to various environmental stresses conferred by the salt-responsive rice gene ONAC063 in transgenic Arabidopsis. Planta 229, 1065–1075. doi: 10.1007/s00425-009-0895-5

PubMed Abstract | Crossref Full Text | Google Scholar

Zechmann, B., Ller, M. M. U., and Zellnig, G. (2008). “Modified levels of cysteine affect glutathione metabolism in plant cells,” in Sulfur assimilation and abiotic stress in plants (Springer Berlin Heidelberg, Berlin, Heidelberg), 193–206.

Google Scholar

Zeng, G., Wu, Z., Cao, W., Wang, Y., Deng, X., and Zhou, Y. (2018). Identification of anti-nociceptive constituents from the pollen of Typha angustifolia L. using effect-directed fractionation. Nat. Prod. Res. 34, 1041–1045. doi: 10.1080/14786419.2018.1539979

PubMed Abstract | Crossref Full Text | Google Scholar

Zhai, Z., Liu, H., and Shanklin, J. (2021). Ectopic expression of OLEOSIN 1 and inactivation of GBSS1 have synergistic effects on oil accumulation in plant leaves. Plants 10, 513. doi: 10.3390/plants10030513

PubMed Abstract | Crossref Full Text | Google Scholar

Zhao, H., Guan, J., Liang, Q., Zhang, X., Hu, H., and Zhang, J. (2021). Effects of cadmium stress on growth and physiological characteristics of sassafras seedlings. Sci. Rep-Uk 11, 9913. doi: 10.1038/s41598-021-89322-0

PubMed Abstract | Crossref Full Text | Google Scholar

Zou, C., Lu, T., Wang, R., Xu, P., Jing, Y., Wang, R., et al. (2022). Comparative physiological and metabolomic analyses reveal that Fe3O4 and ZnO nanoparticles alleviate Cd toxicity in tobacco. J. Nanobiotechnol. 20, 302. doi: 10.1186/s12951-022-01509-3

PubMed Abstract | Crossref Full Text | Google Scholar

Keywords: cadmium toxicity, SiO2 nanoparticles, transcriptome analysis, sucrose metabolism, regulation pathway

Citation: Yang X, Zhao W, Li H, Sun L, Wang L, Wang Z, Yang J, Zhang B, Zhao L, Zhang X, Sun L and Ma J (2025) Silica nanoparticles alleviate cadmium toxicity to Pisum sativum L. seedling growth by remodeling carbon-nitrogen metabolism. Front. Plant Sci. 16:1641785. doi: 10.3389/fpls.2025.1641785

Received: 05 June 2025; Accepted: 28 September 2025;
Published: 23 October 2025.

Edited by:

Kamal Tyagi, Cornell University, United States

Reviewed by:

Saima Muzammil, Government College University, Faisalabad, Pakistan
Tauseef Anwar, Islamia University of Bahawalpur, Pakistan

Copyright © 2025 Yang, Zhao, Li, Sun, Wang, Wang, Yang, Zhang, Zhao, Zhang, Sun and Ma. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

*Correspondence: Jinhu Ma, bWpoMTA5QDEyNi5jb20=

These authors have contributed equally to this work and share first authorship

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