Frontiers in Plant Science | Functional and Applied Plant Genomics

Original Research

Published on 14 Oct 2025

Prediction of harvest-related traits in barley using high-throughput phenotyping data and machine learning

in Functional and Applied Plant Genomics

Hans Tietze
Lamis Abdelhakim
Barbora Pleskačová
Ayelet Kurtz-Sohn
Eyal Fridman
Zoran Nikoloski
Klára Panzarová

Frontiers in Plant Science

doi 10.3389/fpls.2025.1686506

667 views

Original Research

Published on 14 Oct 2025

Comparative analysis of chloroplast genomes in Carica species reveals evolutionary relationships of papaya and the development of efficient molecular markers

in Functional and Applied Plant Genomics

Yajin Chen
Xiaoxi Du
Lei Pan
Qiyuan Huang
Zhigang Hao

Frontiers in Plant Science

doi 10.3389/fpls.2025.1686914

1,287 views

Original Research

Published on 14 Oct 2025

Yield and yield component trait analysis with DArT genotyping for GWAS in soybean grown in drought conditions of Kazakhstan

in Functional and Applied Plant Genomics

Aigul Amangeldiyeva
Raushan Yerzhebayeva
Shynar Mazkirat
Svetlana Didorenko
Sholpan Bastaubayeva
Bekzhan Maikotov
Rinat Kassenov
Assel Jenisbayeva
Yuri Shavrukov

Frontiers in Plant Science

doi 10.3389/fpls.2025.1674201

529 views

Original Research

Published on 13 Oct 2025

Re-calibration of flow cytometry standards for plant genome size estimation

in Functional and Applied Plant Genomics

Abhishek Soni
Robert J. Henry

Frontiers in Plant Science

doi 10.3389/fpls.2025.1548766

981 views

Original Research

Accepted on 10 Oct 2025

Differential Gene Expression and Phenotypic Variation Across Tissues Between Saccharum officinarum and S. spontaneum

in Functional and Applied Plant Genomics

Qin-Nan Wang
Sheng-Ren Sun
Jun-Lv Chen
Jing-Ru Zhou
Yuan-Xia Qin
Wei Zhang
Li-Yu Chen
San-Ji Gao

Frontiers in Plant Science

doi 10.3389/fpls.2025.1696921

125 views

Original Research

Accepted on 10 Oct 2025

TPS5 and TOR signaling components are determinants of Populus balsamifera leaf morphology

in Functional and Applied Plant Genomics

Raju Soolanayakanahally
Marc Champigny
Shankar Pahari
Charles A Hefer
Salim N Silim
Shawn D Mansfield

Frontiers in Plant Science

doi 10.3389/fpls.2025.1683866

179 views

Original Research

Accepted on 09 Oct 2025

Study on mechanism of Temperature-Modulated Polyphenolic Biosynthesis in Cigar Tobacco Leaves

in Functional and Applied Plant Genomics

Jiahao Kang
Bo Fu
Xiaoxiao Yan
Menglan Xiao
Mingqin Zhao
Weili Yang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1693512

129 views

Review

Accepted on 09 Oct 2025

Perspectives of utilization of Aegilops species containing the U genome in wheat breeding (review)

in Functional and Applied Plant Genomics

Ekaterina D Badaeva
Maida Jazmin González Franco
Olga Razumovao
Nadezhda A. Tereshchenko
Mikhail Divashuk

Frontiers in Plant Science

doi 10.3389/fpls.2025.1661257

137 views

Original Research

Published on 09 Oct 2025

Fine mapping of the major-effect QTL qPHS4.1 revealed a CsDOG1 gene controlling pre-harvest sprouting in cucumber (Cucumis sativus L.)

in Functional and Applied Plant Genomics

Mingming Cao
Qiang Deng
Huizhe Wang
Changyue Liu
Haiyan Zhao
Ruihuan Yang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1701268

1,271 views

Original Research

Published on 08 Oct 2025

Genome-wide identification of GH17 family genes and their expression patterns associated with bud dormancy-regrowth regulation in Prunus persica

in Functional and Applied Plant Genomics

Xuehui Zhao
Haifeng Xie
Yifei Han
Jiaqi Zhang
Yihua Qi
Zejie Zhang
Maoxiang Sun
Meiying Liu
Fen Wang
Qingjie Wang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1693135

1,173 views

Review

Published on 08 Oct 2025

Research progress on the synergistic regulation of MYB transcription factor-mediated developmental plasticity and stress responses in rice

in Functional and Applied Plant Genomics

Wenyan Peng
Yi Zhang
Hongjun Xie
Yinghong Yu
Mingdong Zhu

Frontiers in Plant Science

doi 10.3389/fpls.2025.1668800

844 views

Technology and Code

Published on 07 Oct 2025

Optimizing fitness: plastic flowering time in variable environments

in Functional and Applied Plant Genomics

Wei Dong
Yalin Zhang
Yue Xing
Kexin Chang
Nianwei Qiu
Yuguang Song

Frontiers in Plant Science

doi 10.3389/fpls.2025.1690015

763 views

Original Research

Accepted on 06 Oct 2025

Comprehensive Identification, Characterization, and Expression Analysis of m6A Methylation Transferase Gene Family in Maize (Zea mays L.)

in Functional and Applied Plant Genomics

Chunlei Li
Ming He
Xinyi Liu
Qingxue Lv
Xiaoming Yu
Xiaoxue Fan
Xia Bai
Jie Cong
Chuanbo Sun

Frontiers in Plant Science

doi 10.3389/fpls.2025.1673408

141 views

Original Research

Published on 02 Oct 2025

Analysis of the mitochondrial genome of the Camellia sinensis cv. ‘Zhuyeqi’: multichromosomal structure, RNA editing sites, and evolutionary characterization

in Functional and Applied Plant Genomics

Zhiyin Chen
Wei Zhou
Zixu Wang
Ziyi Chen
Xinyuan You
Yihui Gong

Frontiers in Plant Science

doi 10.3389/fpls.2025.1644130

1,391 views

Opinion

Published on 01 Oct 2025

Decoding the mystery: AI-assisted bioinformatics and functional genomics technologies in medicinal plants

in Functional and Applied Plant Genomics

Cheng Song
Irfan Ali Sabir
Wanli Zhao
Yunpeng Cao

Frontiers in Plant Science

doi 10.3389/fpls.2025.1678483

2,440 views

Original Research

Accepted on 30 Sep 2025

Exogenous H2S Enhances Salt Tolerance in Sorghum Seedlings by Stimulating the AsA-GSH Cycle in Chloroplasts to Improve Photosynthesis

in Functional and Applied Plant Genomics

Chang Liu
Sitong Liu
Xin Hu
Xiaolong Shi
Chunjuan Liu
Lu Sun
Yufei Zhou

Frontiers in Plant Science

doi 10.3389/fpls.2025.1664076

181 views