Frontiers in Plant Science | Functional and Applied Plant Genomics

Original Research

Published on 10 Jul 2026

Bacillus amyloliquefaciens ART9 modulates the growth of Radix serratulae Chinensis through rhizosphere microbiome reprogramming and root transcriptomic regulation

in Functional and Applied Plant Genomics

Jiaxin Wang
Jinjie Xu
Pengzhong Fu
Jiaxing Li
Bin Tang
Yahan Zhang
Zhixiong Zeng
Yafen Fu

Frontiers in Plant Science

doi 10.3389/fpls.2026.1891133

281 views

Original Research

Published on 10 Jul 2026

Genome-wide analysis and functional characterization of AsTPS genes in Chinese angelica (Angelica sinensis)

in Functional and Applied Plant Genomics

Heng Xiang
Mengqi Sui
Anqi Wang
Junzhuo Zhang
Shengli Yao
Chao Xiong
Ran Xu

Frontiers in Plant Science

doi 10.3389/fpls.2026.1872863

219 views

Original Research

Published on 08 Jul 2026

High-density genetic mapping reveals QTLs associated with Huanglongbing tolerance in citrus

in Functional and Applied Plant Genomics

Popat Nanaso Gaikwad
Gurupkar Singh Sidhu
Gurpreet Kaur
Harmanpreet Kaur
Manmohan Dhkal
Pooja Manchanda
H. S. Rattanpal
Parveen Chhuneja

Frontiers in Plant Science

doi 10.3389/fpls.2026.1848541

601 views

Original Research

Published on 08 Jul 2026

Transcriptome analysis reveals seasonal dynamics and oil yield associated regulatory networks in Camphora longepaniculata

in Functional and Applied Plant Genomics

Zhou Xu
Tianfei Dai
Zhonghua Liang
Qi Zhong
Mengyang Du
Junqiang Li
Xin Liu
Lina Meng
Wenwen Liu
Li Yang

Frontiers in Plant Science

doi 10.3389/fpls.2026.1875536

275 views

Original Research

Accepted on 07 Jul 2026

Assembly and comparative analysis of the multipartite mitochondrial genome of Curcuma wenyujin reveals sequence divergence, structural variation, and phylogenetic placement within Commelinales

in Functional and Applied Plant Genomics

Zhihao Lin
Zihan Sun
Ruike Fan
Yiwen Wang
Li-Shang Dai
Wenfei He

Frontiers in Plant Science

Review

Published on 07 Jul 2026

Integrating multiomic resources and gene expression studies to identify candidates for engineering climate-resilient Brassica

in Functional and Applied Plant Genomics

Rafaqat Ali Gill
Md Mostofa Uddin Helal
Qian Xing
Skhawat Ali
Weijun Zhou
Ralf Müller-Xing

Frontiers in Plant Science

doi 10.3389/fpls.2026.1747148

554 views

Original Research

Published on 07 Jul 2026

Genome-wide identification of the SnRK2 gene family and its response to drought stress in Bombax ceiba

in Functional and Applied Plant Genomics

Yumei Shi
Zhifang Zhang
Ruoxin He
Liangju He
Yongxiu Wang
Wenjie Ma
Zhenghao Yan
Youqiang Tao
Zhi Yang
Changxin Luo

Frontiers in Plant Science

doi 10.3389/fpls.2026.1873223

307 views

Original Research

Published on 07 Jul 2026

High-quality draft genome assembly and functional annotation of Musa textilis cv. Inosa

in Functional and Applied Plant Genomics

Roneil Christian S. Alonday
Julianne Vilela
Damsel C. Bangcal-Villariño
John Ivan I. Pasquil
Kaito O. Furusho
Adrian Sam Arcillo
Maiah Cheng
Maria Genaleen Q. Diaz
Antonio G. Lalusin
Antonio C. Laurena

Frontiers in Plant Science

doi 10.3389/fpls.2026.1866360

593 views

Original Research

Accepted on 06 Jul 2026

Roles of plasmid-borne nod genes and chromosomal genes of Bradyrhizobium guangxiense CCBAU 53363T in peanut nodulation

in Functional and Applied Plant Genomics

Jishun Yang
YUE WU
Dunwei Ci
Zhengfeng Wu
Yongmei Zheng
Tianyi Yu
Juxiang Wu
Shangxia Li
Qiqi Sun
Zhen Yang

Frontiers in Plant Science

Original Research

Published on 03 Jul 2026

Genome-wide identification and characterization of VQ genes from cultivated peanut and their response to abiotic stresses

in Functional and Applied Plant Genomics

Yulong Liu
Rong Hu
Qianqian Wang
Shutao Yu
Haocui Miao
Chunjuan Li
Quanxi Sun
Shihua Shan
Cuiling Yuan

Frontiers in Plant Science

doi 10.3389/fpls.2026.1865834

402 views

Original Research

Published on 03 Jul 2026

Deciphering the role of NtabCrRLK47 in rhizosphere microbiome remodeling and tobacco growth promotion

in Functional and Applied Plant Genomics

Guoping Wang
Yuqing Qi
Gaoyang Fei
Shibing Geng
Yunsong Chen
Canhua Lu
Moh Tariq
Yunye Zheng

Frontiers in Plant Science

doi 10.3389/fpls.2026.1864982

383 views

Original Research

Published on 02 Jul 2026

Genome-wide identification of the SBP-box gene family in banana and functional characterization of MaSBP17 as a negative regulator of fruit ripening

in Functional and Applied Plant Genomics

Shiyu Lu
Yu Yang
Weijun Xiao
Zhiwei Jia
Yulin Hu
Yajie Duan
Zhencai Pang
Dequan Sun
Zhiwei Lu
Huigang Hu

Frontiers in Plant Science

doi 10.3389/fpls.2026.1879074

384 views

Original Research

Accepted on 01 Jul 2026

CRISPR/Cas9-mediated mutagenesis of BnaAOG1s reveals functional divergence in silique and seed development in Brassica napus L

in Functional and Applied Plant Genomics

Jiaxu Xiao
Xiaonan Guo
Aoli Liao
Zhiru Bao
Jianwei Gu

Frontiers in Plant Science

121 views

Original Research

Published on 01 Jul 2026

Transcriptomic and metabolomic profiling of Polygonatum cyrtonema Hua across different growth years

in Functional and Applied Plant Genomics

Jujia Zheng
Weijie Huang
Chun Chen
Pianpian Chen

Frontiers in Plant Science

doi 10.3389/fpls.2026.1860542

368 views

Original Research

Published on 01 Jul 2026

QTL mapping for leaf rust resistance in bread wheat using PBW343/W8627 RIL population

in Functional and Applied Plant Genomics

K. S. Vindhya
Renu Sharma
Satish Kumar
Pramod Prasad
Prem Lal Kashyap
Rajender Singh
M. Sivasamy
Sripada M. Udupa
Indu Sharma
Ratan Tiwari

Frontiers in Plant Science

doi 10.3389/fpls.2026.1851529

660 views

Original Research

Accepted on 30 Jun 2026

Genome-wide characterization of the CIPK gene family in mung bean and functional validation of VrCIPK5 in drought stress response

in Functional and Applied Plant Genomics

Lili Yin
Jiaqi Liao
Jie Gao
Yonglin Xiao
Wenye Hu
Xiaoliang Chen

Frontiers in Plant Science

143 views

Original Research

Published on 30 Jun 2026

SSR-based genetic diversity and population structure analysis of 144 core pea (Pisum sativum L.) accessions

in Functional and Applied Plant Genomics

Jiu-Yan Zhao
Feng-Jing Song
Jun-Jie Hao
Shi-Zuo Qiu
Xiao Cui
Gong-Qiang Jiao
Huan Song
Jing Bai
Guan Li
Peng Chen

Frontiers in Plant Science

doi 10.3389/fpls.2026.1806277

683 views

Original Research

Published on 30 Jun 2026

Genome-wide identification and analysis of RING finger gene family and the self-compatibility-associated SBP1 gene in goji berry (Lycium barbarum)

in Functional and Applied Plant Genomics

Zhonghua Wang
Jiali Wu
Zijun Yang
Chenglin Zhao
Yajing An
Cuiping Wang

Frontiers in Plant Science

doi 10.3389/fpls.2026.1863389

431 views

Original Research

Accepted on 29 Jun 2026

Identification of the Cation/H+ Exchanger (CAX) Genes in Peanut and Functional Analysis of AhCAX8 in Response to Salt Stress

in Functional and Applied Plant Genomics

Fangyan Ma
Hongfeng Wang
Guang Yuan
Chen Zhang
Yang Xu
Dunwei Ci
Guanchu Zhang

Frontiers in Plant Science

109 views

Review

Published on 29 Jun 2026

Statistics and data science unlock the predictive power of quantitative genetics

in Functional and Applied Plant Genomics

Osval A. Montesinos-López
José Crossa
Srikanth Kumar Karaikal
Leonardo Ornella
Joel A. Martínez-Regalado
Cinthia Leonora Murillo-Ávalos
Abelardo Montesinos-López
Iván Delgado-Enciso
Roberto de la Rosa Santa-María
Ezequiel Gamas-Alpuche

Frontiers in Plant Science

doi 10.3389/fpls.2026.1870471

990 views

Correction

Published on 22 Jun 2026

Correction: Yield and yield component trait analysis with DArT genotyping for GWAS in soybean grown in drought conditions of Kazakhstan

in Functional and Applied Plant Genomics

Aigul Amangeldiyeva
Raushan Yerzhebayeva
Shynar Mazkirat
Svetlana Didorenko
Sholpan Bastaubayeva
Bekzhan Maikotov
Rinat Kassenov
Assel Jenisbayeva
Yuri Shavrukov

Frontiers in Plant Science

doi 10.3389/fpls.2026.1910549

276 views

Editorial

Accepted on 19 Jun 2026

Editorial: Utilizing Machine Learning with Phenotypic and Genotypic Data to enhance Effective Breeding in Agricultural and Horticultural Crops

in Functional and Applied Plant Genomics

Jinyoung Y Barnaby
Andrés J. Cortés

Frontiers in Plant Science

370 views

Review

Published on 18 Jun 2026

Genomic advances in orphan and underutilized Brassicaceae crops and their wild relatives

in Functional and Applied Plant Genomics

Junrey Amas
Rajesh Kumar Natarajan
William J. W. Thomas
David Edwards
Jacqueline Batley
Aria Dolatabadian

Frontiers in Plant Science

doi 10.3389/fpls.2026.1878836

946 views

Data Report

Accepted on 17 Jun 2026

The complete chloroplast genome of Trachyspermum ammi (L.) Sprague reveals a species-specific inverted repeat expansion

in Functional and Applied Plant Genomics

Ramawatar Nagar
Vandna Patial
Nimmy MS
Sharda Choudhary

Frontiers in Plant Science

322 views

723 articles

articles

Bacillus amyloliquefaciens ART9 modulates the growth of Radix serratulae Chinensis through rhizosphere microbiome reprogramming and root transcriptomic regulation

Genome-wide analysis and functional characterization of AsTPS genes in Chinese angelica (Angelica sinensis)

High-density genetic mapping reveals QTLs associated with Huanglongbing tolerance in citrus

Transcriptome analysis reveals seasonal dynamics and oil yield associated regulatory networks in Camphora longepaniculata

Assembly and comparative analysis of the multipartite mitochondrial genome of Curcuma wenyujin reveals sequence divergence, structural variation, and phylogenetic placement within Commelinales

Integrating multiomic resources and gene expression studies to identify candidates for engineering climate-resilient Brassica

Genome-wide identification of the SnRK2 gene family and its response to drought stress in Bombax ceiba

High-quality draft genome assembly and functional annotation of Musa textilis cv. Inosa

Roles of plasmid-borne nod genes and chromosomal genes of Bradyrhizobium guangxiense CCBAU 53363T in peanut nodulation

Genome-wide identification and characterization of VQ genes from cultivated peanut and their response to abiotic stresses

Deciphering the role of NtabCrRLK47 in rhizosphere microbiome remodeling and tobacco growth promotion

Genome-wide identification of the SBP-box gene family in banana and functional characterization of MaSBP17 as a negative regulator of fruit ripening

CRISPR/Cas9-mediated mutagenesis of BnaAOG1s reveals functional divergence in silique and seed development in Brassica napus L

Transcriptomic and metabolomic profiling of Polygonatum cyrtonema Hua across different growth years

QTL mapping for leaf rust resistance in bread wheat using PBW343/W8627 RIL population

Genome-wide characterization of the CIPK gene family in mung bean and functional validation of VrCIPK5 in drought stress response

SSR-based genetic diversity and population structure analysis of 144 core pea (Pisum sativum L.) accessions

Genome-wide identification and analysis of RING finger gene family and the self-compatibility-associated SBP1 gene in goji berry (Lycium barbarum)

Identification of the Cation/H+ Exchanger (CAX) Genes in Peanut and Functional Analysis of AhCAX8 in Response to Salt Stress

Statistics and data science unlock the predictive power of quantitative genetics

Correction: Yield and yield component trait analysis with DArT genotyping for GWAS in soybean grown in drought conditions of Kazakhstan

Editorial: Utilizing Machine Learning with Phenotypic and Genotypic Data to enhance Effective Breeding in Agricultural and Horticultural Crops

Genomic advances in orphan and underutilized Brassicaceae crops and their wild relatives

The complete chloroplast genome of Trachyspermum ammi (L.) Sprague reveals a species-specific inverted repeat expansion