Frontiers in Plant Science | Functional and Applied Plant Genomics

Original Research

Published on 27 Mar 2025

Peanut leaf transcriptomic dynamics reveals insights into the acclimation response to elevated carbon dioxide under semiarid conditions

in Functional and Applied Plant Genomics

Haydee Laza
Bishwoyog Bhattarai
Venugopal Mendu
Mark D. Burow
Yves Emendack
Jacobo Sanchez
Aarti Gupta
Mostafa Abdelrahman
Lam-Son Phan Tran
David T. Tissue

Frontiers in Plant Science

doi 10.3389/fpls.2024.1407574

229 views

Original Research

Accepted on 26 Mar 2025

Identification of Novel Candidate Genes for Regulating Oil Composition in Soybean Seeds under Environmental Stresses

in Functional and Applied Plant Genomics

Patrick Bewick
Peter Forstner
Bo Zhang
Eva Collakova

Frontiers in Plant Science

doi 10.3389/fpls.2025.1572319

Original Research

Published on 26 Mar 2025

Comprehensive genome analysis of Streptomyces caeruleatus S14 isolated from rice rhizosphere

in Functional and Applied Plant Genomics

Sucharita Mohapatra
S. R. Prabhukarthikeyan
Gayatri Biswal
Mihira Kumara Mishra
Soumya Shephalika Dash
Gyanisha Nayak
U. Keerthana
C. Parameswaran
P. Panneerselvam
S. D. Mohapatra

Frontiers in Plant Science

doi 10.3389/fpls.2025.1526700

215 views

Original Research

Published on 26 Mar 2025

Phenotypic adaptation and genomic variation of Kandelia obovata associated with its northern introduction along southeastern coast of China

in Functional and Applied Plant Genomics

Jiaqi Zhang
Sheng Ouyang
Xingxing Cai
Sheng Yang
Qiuxia Chen
Ji Yang
Zhiping Song
Wenju Zhang
Yuguo Wang
Yan Zhu

Frontiers in Plant Science

doi 10.3389/fpls.2025.1512620

Data Report

Accepted on 25 Mar 2025

Transcriptome Map and Genome Annotation of Flax Line 3896

in Functional and Applied Plant Genomics

Daiana Zhernova
Alexander A. Arkhipov
Tatiana A. Rozhmina
Alexander A. Zhuchenko
Nadezhda Bolsheva
Elizaveta Sigova
Ekaterina Dvorianinova
Elena Vladimirovna Borkhert
Elena Pushkova
Nataliya V. Melnikova

Frontiers in Plant Science

doi 10.3389/fpls.2025.1520832

Original Research

Accepted on 21 Mar 2025

Uncovering the breeding contribution of transposable elements from landraces to improved varieties using super pan-genome in rice.

in Functional and Applied Plant Genomics

Xiaoxia Li
Xiaofan Dai
Huiying He
Wu Chen
Qian Qian
Lianguang Shang
Longbiao Guo
Wenchuang He

Frontiers in Plant Science

doi 10.3389/fpls.2025.1573546

Original Research

Accepted on 19 Mar 2025

GWAS and WGCNA Analysis Uncover Candidate Genes Associated with Drought in Brassica juncea L

in Functional and Applied Plant Genomics

Yusong Zhang
Xiaoyan Yuan
Yunyun Zhang
Yanqing Luo
Kaiqin Zhao
Feng Zu
Zhengshu Tian
Jinfeng Li
Lifan Zhang
Xiaoying He

Frontiers in Plant Science

doi 10.3389/fpls.2025.1551804

137 views

Original Research

Accepted on 13 Mar 2025

Genotyping and diversity analysis of local avocado landraces in La Palma, Canary Islands

in Functional and Applied Plant Genomics

Verónica Pérez
Nerea Larranaga
Maria Librada Alcaraz
Jose I Hormaza

Frontiers in Plant Science

doi 10.3389/fpls.2025.1572870

Original Research

Accepted on 12 Mar 2025

Evolutionary landscape of plant chalcone isomerase-fold (CHI) gene families

in Functional and Applied Plant Genomics

Kai-Yong Luo
Shiping Wang
Ling Yang
Sen-Lin Luo
Jia Cheng
Yang Dong
Ya Ning
Wei-bin Wang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1559547

Original Research

Published on 12 Mar 2025

Synergy of osmotic adjustment and antioxidant activity in Catalpa bungei: alleviating persistent drought stress from SL to NSL

in Functional and Applied Plant Genomics

Xiaochi Yu
Junhui Wang
Wenjun Ma
Fei Yi
Peng Zhang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1536795

225 views

Original Research

Accepted on 07 Mar 2025

Screening and Functional Characterization of Salt-tolerant NAC gene Family Members in Medicago sativa L

in Functional and Applied Plant Genomics

Zhiguang Li
Qianqian Yu
Yue Ma
Fuhong Miao
Lichao Ma
Shuo Li
Kunlong Su
Zeng-Yu Wang
Guofeng Yang

Frontiers in Plant Science

doi 10.3389/fpls.2025.1461735

103 views

Original Research

Published on 07 Mar 2025

Profiling of rhizosphere-associated microbial communities in North Alabama soils infested with varied levels of reniform nematodes

in Functional and Applied Plant Genomics

Sowndarya Karapareddy
Varsha C. Anche
Sowjanya R. Tamatamu
Madhusudhana R. Janga
Kathy Lawrence
Leopold M. Nyochembeng
Antonette Todd
Lloyd T. Walker
Venkateswara R. Sripathi

Frontiers in Plant Science

doi 10.3389/fpls.2025.1521579

518 views

Data Report

Published on 05 Mar 2025

Chromosome-level assembly of the Isodon lophanthoides genome

in Functional and Applied Plant Genomics

Yubang Gao

Frontiers in Plant Science

doi 10.3389/fpls.2025.1528404

371 views

Data Report

Published on 04 Mar 2025

Genetic diversity of Hippophae rhamnoides varieties with different fruit characteristics based on whole-genome sequencing

in Functional and Applied Plant Genomics

Nataliya V. Melnikova
Alexander A. Arkhipov
Yury A. Zubarev
Roman O. Novakovskiy
Anastasia A. Turba
Elena N. Pushkova
Daiana A. Zhernova
Anna S. Mazina
Ekaterina M. Dvorianinova
Elizaveta A. Sigova

Frontiers in Plant Science

doi 10.3389/fpls.2025.1542552

437 views

Original Research

Published on 04 Mar 2025

Single-cell RNA sequencing of shoot apex reveals the mechanism of cyclin regulating cell division via auxin signaling pathway in Populus alba

in Functional and Applied Plant Genomics

Jing-hui Liang
Zhao-qun Wu
Yue-Xuan Zhang
Ye-Bo Yang
Shi-Yi Wang
Meng-Yu Gai
Yu-Wen Wang
Xiu-Xing Zhang
Jing Xue
Bo-Hao Duan

Frontiers in Plant Science

doi 10.3389/fpls.2025.1555388

636 views

Original Research

Published on 28 Feb 2025

Transcriptomic analysis of two Chinese wheat landraces with contrasting Fusarium head blight resistance reveals miRNA-mediated defense mechanisms

in Functional and Applied Plant Genomics

Lijuan Wu
Junqiang Wang
Shian Shen
Zaijun Yang
Xinkun Hu

Frontiers in Plant Science

doi 10.3389/fpls.2025.1537605

584 views

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Articles

Peanut leaf transcriptomic dynamics reveals insights into the acclimation response to elevated carbon dioxide under semiarid conditions

Identification of Novel Candidate Genes for Regulating Oil Composition in Soybean Seeds under Environmental Stresses

Comprehensive genome analysis of Streptomyces caeruleatus S14 isolated from rice rhizosphere

Phenotypic adaptation and genomic variation of Kandelia obovata associated with its northern introduction along southeastern coast of China

Transcriptome Map and Genome Annotation of Flax Line 3896

Uncovering the breeding contribution of transposable elements from landraces to improved varieties using super pan-genome in rice.

GWAS and WGCNA Analysis Uncover Candidate Genes Associated with Drought in Brassica juncea L

Genotyping and diversity analysis of local avocado landraces in La Palma, Canary Islands

Evolutionary landscape of plant chalcone isomerase-fold (CHI) gene families

Synergy of osmotic adjustment and antioxidant activity in Catalpa bungei: alleviating persistent drought stress from SL to NSL

Screening and Functional Characterization of Salt-tolerant NAC gene Family Members in Medicago sativa L

Profiling of rhizosphere-associated microbial communities in North Alabama soils infested with varied levels of reniform nematodes

Chromosome-level assembly of the Isodon lophanthoides genome

Genetic diversity of Hippophae rhamnoides varieties with different fruit characteristics based on whole-genome sequencing

Single-cell RNA sequencing of shoot apex reveals the mechanism of cyclin regulating cell division via auxin signaling pathway in Populus alba

Transcriptomic analysis of two Chinese wheat landraces with contrasting Fusarium head blight resistance reveals miRNA-mediated defense mechanisms