Frontiers in Plant Science | Functional and Applied Plant Genomics

Original Research

Published on 07 Jan 2025

Identification of 39 stripe rust resistance loci in a panel of 465 winter wheat entries presumed to have high-temperature adult-plant resistance through genome-wide association mapping and marker-assisted detection

in Functional and Applied Plant Genomics

Fangjie Yao
Meinan Wang
Deven R. See
Ennian Yang
Guoyue Chen
Xianming Chen

Frontiers in Plant Science

doi 10.3389/fpls.2024.1514926

2,223 views
3 citations

Original Research

Published on 23 Dec 2024

Genome-wide identification and expression analysis of the WRKY gene family in Sophora flavescens during tissue development and salt stress

in Functional and Applied Plant Genomics

Jin Li
Xi Wang
Junjie Lu
Huifang Song
Haiying Lei
Tianzeng Niu
Ake Liu

Frontiers in Plant Science

doi 10.3389/fpls.2024.1520786

2,314 views
4 citations

Original Research

Published on 20 Dec 2024

The characterization of OfRGA in regulation of flower size through tuning cell expansion genes

in Functional and Applied Plant Genomics

Qianqian Wan
Mei Lu
Gege Jiang
Jiexin Shao
Tao Chen
Liyuan Yang
Irshad Ahmad Khan
Jinping Deng
Shiwei Zhong
Yiguang Wang

Frontiers in Plant Science

doi 10.3389/fpls.2024.1502347

1,843 views
2 citations

Original Research

Published on 20 Dec 2024

Mapping heat tolerance QTLs in Triticum durum-Aegilops speltoides backcross introgression lines to enhance thermotolerance in wheat

in Functional and Applied Plant Genomics

Navaneetha Krishnan J.
Satinder Kaur
Uttam Kumar
Rohtas Singh
Guriqbal Singh Dhillon
Pradeep Kumar Bhati
Parveen Chhuneja

Frontiers in Plant Science

doi 10.3389/fpls.2024.1485914

2,238 views
1 citation

Systematic Review

Published on 18 Dec 2024

Advancing crop improvement through GWAS and beyond in mung bean

in Functional and Applied Plant Genomics

Syed Riaz Ahmed
Muhammad Jawad Asghar
Amjad Hameed
Maria Ghaffar
Muhammad Shahid

Frontiers in Plant Science

doi 10.3389/fpls.2024.1436532

6,043 views
11 citations

Original Research

Published on 18 Dec 2024

Genome-wide association study identifies key F-box genes linked to ethylene responsiveness and root growth in rice (Oryza sativa L.)

in Functional and Applied Plant Genomics

Suparad Klinsawang
Wanchana Aesomnuk
Piyamongkol Mangkalasane
Vinitchan Ruanjaichon
Jonaliza L. Siangliw
Bipin K. Pandey
Malcolm J. Bennett
Samart Wanchana
Siwaret Arikit

Frontiers in Plant Science

doi 10.3389/fpls.2024.1501533

2,536 views
2 citations

Original Research

Published on 16 Dec 2024

Integrated transcriptomic, proteomic and metabolomic analyses revealing the roles of amino acid and sucrose metabolism in augmenting drought tolerance in Agropyron mongolicum

in Functional and Applied Plant Genomics

Xiaoran Ma
Qingwei Liang
Yusi Han
Lu Fan
Dengxia Yi
Lin Ma
Jun Tang
Xuemin Wang

Frontiers in Plant Science

doi 10.3389/fpls.2024.1515944

3,658 views
4 citations

Original Research

Published on 13 Dec 2024

Identification and analysis of major latex protein (MLP) family genes in Rosa chinensis responsive to Botrytis cinerea infection by RNA-seq approaches

in Functional and Applied Plant Genomics

Haoyuan Chen
Qingkui Li
Peilei Cheng
Taotao Yan
Chunlan Dong
Zhe Hou
Peihuang Zhu
Changbing Huang

Frontiers in Plant Science

doi 10.3389/fpls.2024.1511597

2,992 views
1 citation

Editorial

Published on 12 Dec 2024

Editorial: Crop abiotic stress: advances in germplasm/gene discovery and utilization

in Functional and Applied Plant Genomics

Guowei Li
Hui Song
Ran Hovav
Dayong Cui

Frontiers in Plant Science

doi 10.3389/fpls.2024.1524430

1,647 views

Data Report

Published on 12 Dec 2024

Characterization of the complete chloroplast genome of the endangered and endemic bornean fruit Artocarpus tamaran Becc

in Functional and Applied Plant Genomics

Reni Lestari
Mahat Magandhi
Muhammad Rifqi Hariri
Ikhsan Noviady
Aditya Nugroho
Fitri Indriani

Frontiers in Plant Science

doi 10.3389/fpls.2024.1513364

1,964 views
1 citation

Original Research

Published on 11 Dec 2024

Understanding the defense mechanism of Allium plants through the onion isoallicin-omics study

in Functional and Applied Plant Genomics

Heejung Cho
Ji Yeon Park
Duck Hyun Kim
JiWon Han
Karthi Natesan
Min-Seon Choi
Seon-Kyeong Lee
Jiseon Kim
Kun Cho
Byoung Ohg Ahn

Frontiers in Plant Science

doi 10.3389/fpls.2024.1488553

4,418 views
3 citations

Editorial

Published on 09 Dec 2024

Editorial: Wheat disease resistance: diagnosis, germplasm mining, and molecular breeding

in Functional and Applied Plant Genomics

Runsheng Ren
Xinli Zhou
Jing Feng

Frontiers in Plant Science

doi 10.3389/fpls.2024.1500414

2,517 views
2 citations

Original Research

Published on 09 Dec 2024

Evaluation of stripe rust resistance and analysis of resistance genes in wheat genotypes from Pakistan and Southwest China

in Functional and Applied Plant Genomics

Sakina Abbas
Yunfang Li
Jing Lu
Jianming Hu
Xinnuo Zhang
Xue Lv
Armghan Shahzad
Donghui Ao
Maryam Abbas
Yu Wu

Frontiers in Plant Science

doi 10.3389/fpls.2024.1494566

3,887 views
6 citations

Editorial

Published on 04 Dec 2024

Editorial: Research advances on forest tree functional genomics and breeding

in Functional and Applied Plant Genomics

Juan Du
Tianqi Ye
Yi An
Yicun Chen
Jack Wang
Jiehua Wang
Mengzhu Lu
Quanzi Li

Frontiers in Plant Science

doi 10.3389/fpls.2024.1508507

1,978 views

Review

Published on 03 Dec 2024

Cuticular wax in wheat: biosynthesis, genetics, and the stress response

in Functional and Applied Plant Genomics

Ruiyang Tian
Wendi Liu
Yuhai Wang
Wenqiang Wang

Frontiers in Plant Science

doi 10.3389/fpls.2024.1498505

4,562 views
5 citations

Original Research

Published on 03 Dec 2024

Genome-wide identification and expression analysis of the AS2/LOB gene family in physic nut

in Functional and Applied Plant Genomics

Yuehui Tang
Xiaohui Wang
Jiayu Feng
Yaoyao Wang
Tengfei Liu
Xinxin Bao

Frontiers in Plant Science

doi 10.3389/fpls.2024.1504093

1,959 views
3 citations

Original Research

Published on 28 Nov 2024

AgoArmet and AgoC002: key effector proteins in cotton aphids host adaptation

in Functional and Applied Plant Genomics

Hui Xue
Mengjie Yan
Xiangzhen Zhu
Li Wang
Lizhen Chen
Junyu Luo
Jinjie Cui
Xueke Gao

Frontiers in Plant Science

doi 10.3389/fpls.2024.1500834

2,271 views
1 citation

Original Research

Published on 28 Nov 2024

Elemental profiling and genome-wide association studies reveal genomic variants modulating ionomic composition in Populus trichocarpa leaves

in Functional and Applied Plant Genomics

Raphael Ployet
Kai Feng
Jin Zhang
Ivan Baxter
David C. Glasgow
Hunter B. Andrews
Miguel Rodriguez
Jin-Gui Chen
Gerald A. Tuskan
Timothy J. Tschaplinski

Frontiers in Plant Science

doi 10.3389/fpls.2024.1450646

3,004 views

Original Research

Published on 20 Nov 2024

Metabolomic and transcriptomic analyses jointly reveal the mechanism underlying the reddening of Chimonanthus praecox stamens

in Functional and Applied Plant Genomics

Bin Liu
Huafeng Wu
Yinzhu Cao
Guanpeng Ma
Xiaowen Zheng
Haoxiang Zhu
Xingrong Song
Shunzhao Sui

Frontiers in Plant Science

doi 10.3389/fpls.2024.1491246

1,842 views
2 citations

Original Research

Published on 20 Nov 2024

Genome expression analysis of basic helix-loop-helix transcription factors in Sea buckthorn (Hippophae rhamnoides L.)

in Functional and Applied Plant Genomics

Jiajia Zhang
Gaigai Du
Guoyun Zhang
Jianguo Zhang
Songfeng Diao

Frontiers in Plant Science

doi 10.3389/fpls.2024.1487960

1,614 views

Original Research

Published on 18 Nov 2024

Genome-wide association analysis and genomic prediction of salt tolerance trait in soybean germplasm

in Functional and Applied Plant Genomics

Rongqing Xu
Qing Yang
Zhi Liu
Xiaolei Shi
Xintong Wu
Yuehan Chen
Xinyu Du
Qiqi Gao
Di He
Ainong Shi

Frontiers in Plant Science

doi 10.3389/fpls.2024.1494551

3,347 views
7 citations

Original Research

Published on 14 Nov 2024

Identification of QTL-allele systems of seed size and oil content for simultaneous genomic improvement in Northeast China soybeans

in Functional and Applied Plant Genomics

Jianbo He
Lianshun Fu
Xiaoshuai Hao
Yicun Wu
Mengfan Wang
Qi Zhang
Weidan Feng
Mengmeng Fu
Yanping Wang
Haixiang Ren

Frontiers in Plant Science

doi 10.3389/fpls.2024.1483995

1,958 views

Original Research

Published on 14 Nov 2024

Resveratrol enhances the tolerance of Malus hupehensis to potassium deficiency stress

in Functional and Applied Plant Genomics

Zhijuan Sun
Tianchao Wang
Jianyu Li
Xiaodong Zheng
Hongjuan Ge
Guangli Sha
Changqing Ma
Qiang Zhao
Caihong Wang
Yike Tian

Frontiers in Plant Science

doi 10.3389/fpls.2024.1503463

1,538 views
2 citations

Methods

Published on 13 Nov 2024

Screening method and metabolic analysis of plant anti-aging microorganisms via ammonia-induced senescence in the duckweed Wolffia microscopica

in Functional and Applied Plant Genomics

Deguan Tan
Lili Fu
Ying Yu
Xuepiao Sun
Jiaming Zhang

Frontiers in Plant Science

doi 10.3389/fpls.2024.1480588

2,950 views
1 citation

654 articles

articles

Identification of 39 stripe rust resistance loci in a panel of 465 winter wheat entries presumed to have high-temperature adult-plant resistance through genome-wide association mapping and marker-assisted detection

Genome-wide identification and expression analysis of the WRKY gene family in Sophora flavescens during tissue development and salt stress

The characterization of OfRGA in regulation of flower size through tuning cell expansion genes

Mapping heat tolerance QTLs in Triticum durum-Aegilops speltoides backcross introgression lines to enhance thermotolerance in wheat

Advancing crop improvement through GWAS and beyond in mung bean

Genome-wide association study identifies key F-box genes linked to ethylene responsiveness and root growth in rice (Oryza sativa L.)

Integrated transcriptomic, proteomic and metabolomic analyses revealing the roles of amino acid and sucrose metabolism in augmenting drought tolerance in Agropyron mongolicum

Identification and analysis of major latex protein (MLP) family genes in Rosa chinensis responsive to Botrytis cinerea infection by RNA-seq approaches

Editorial: Crop abiotic stress: advances in germplasm/gene discovery and utilization

Characterization of the complete chloroplast genome of the endangered and endemic bornean fruit Artocarpus tamaran Becc

Understanding the defense mechanism of Allium plants through the onion isoallicin-omics study

Editorial: Wheat disease resistance: diagnosis, germplasm mining, and molecular breeding

Evaluation of stripe rust resistance and analysis of resistance genes in wheat genotypes from Pakistan and Southwest China

Editorial: Research advances on forest tree functional genomics and breeding

Cuticular wax in wheat: biosynthesis, genetics, and the stress response

Genome-wide identification and expression analysis of the AS2/LOB gene family in physic nut

AgoArmet and AgoC002: key effector proteins in cotton aphids host adaptation

Elemental profiling and genome-wide association studies reveal genomic variants modulating ionomic composition in Populus trichocarpa leaves

Metabolomic and transcriptomic analyses jointly reveal the mechanism underlying the reddening of Chimonanthus praecox stamens

Genome expression analysis of basic helix-loop-helix transcription factors in Sea buckthorn (Hippophae rhamnoides L.)

Genome-wide association analysis and genomic prediction of salt tolerance trait in soybean germplasm

Identification of QTL-allele systems of seed size and oil content for simultaneous genomic improvement in Northeast China soybeans

Resveratrol enhances the tolerance of Malus hupehensis to potassium deficiency stress

Screening method and metabolic analysis of plant anti-aging microorganisms via ammonia-induced senescence in the duckweed Wolffia microscopica