Frontiers in Plant Science | Functional and Applied Plant Genomics

Original Research

Published on 13 Dec 2024

Identification and analysis of major latex protein (MLP) family genes in Rosa chinensis responsive to Botrytis cinerea infection by RNA-seq approaches

in Functional and Applied Plant Genomics

Haoyuan Chen
Qingkui Li
Peilei Cheng
Taotao Yan
Chunlan Dong
Zhe Hou
Peihuang Zhu
Changbing Huang

Frontiers in Plant Science

doi 10.3389/fpls.2024.1511597

2,639 views
1 citation

Editorial

Published on 12 Dec 2024

Editorial: Crop abiotic stress: advances in germplasm/gene discovery and utilization

in Functional and Applied Plant Genomics

Guowei Li
Hui Song
Ran Hovav
Dayong Cui

Frontiers in Plant Science

doi 10.3389/fpls.2024.1524430

1,446 views

Data Report

Published on 12 Dec 2024

Characterization of the complete chloroplast genome of the endangered and endemic bornean fruit Artocarpus tamaran Becc

in Functional and Applied Plant Genomics

Reni Lestari
Mahat Magandhi
Muhammad Rifqi Hariri
Ikhsan Noviady
Aditya Nugroho
Fitri Indriani

Frontiers in Plant Science

doi 10.3389/fpls.2024.1513364

1,746 views

Original Research

Published on 11 Dec 2024

Understanding the defense mechanism of Allium plants through the onion isoallicin-omics study

in Functional and Applied Plant Genomics

Heejung Cho
Ji Yeon Park
Duck Hyun Kim
JiWon Han
Karthi Natesan
Min-Seon Choi
Seon-Kyeong Lee
Jiseon Kim
Kun Cho
Byoung Ohg Ahn

Frontiers in Plant Science

doi 10.3389/fpls.2024.1488553

3,661 views
3 citations

Editorial

Published on 09 Dec 2024

Editorial: Wheat disease resistance: diagnosis, germplasm mining, and molecular breeding

in Functional and Applied Plant Genomics

Runsheng Ren
Xinli Zhou
Jing Feng

Frontiers in Plant Science

doi 10.3389/fpls.2024.1500414

1,961 views
2 citations

Original Research

Published on 09 Dec 2024

Evaluation of stripe rust resistance and analysis of resistance genes in wheat genotypes from Pakistan and Southwest China

in Functional and Applied Plant Genomics

Sakina Abbas
Yunfang Li
Jing Lu
Jianming Hu
Xinnuo Zhang
Xue Lv
Armghan Shahzad
Donghui Ao
Maryam Abbas
Yu Wu

Frontiers in Plant Science

doi 10.3389/fpls.2024.1494566

3,382 views
4 citations

Editorial

Published on 04 Dec 2024

Editorial: Research advances on forest tree functional genomics and breeding

in Functional and Applied Plant Genomics

Juan Du
Tianqi Ye
Yi An
Yicun Chen
Jack Wang
Jiehua Wang
Mengzhu Lu
Quanzi Li

Frontiers in Plant Science

doi 10.3389/fpls.2024.1508507

1,774 views

Review

Published on 03 Dec 2024

Cuticular wax in wheat: biosynthesis, genetics, and the stress response

in Functional and Applied Plant Genomics

Ruiyang Tian
Wendi Liu
Yuhai Wang
Wenqiang Wang

Frontiers in Plant Science

doi 10.3389/fpls.2024.1498505

3,924 views
5 citations

Original Research

Published on 03 Dec 2024

Genome-wide identification and expression analysis of the AS2/LOB gene family in physic nut

in Functional and Applied Plant Genomics

Yuehui Tang
Xiaohui Wang
Jiayu Feng
Yaoyao Wang
Tengfei Liu
Xinxin Bao

Frontiers in Plant Science

doi 10.3389/fpls.2024.1504093

1,795 views
3 citations

Original Research

Published on 28 Nov 2024

AgoArmet and AgoC002: key effector proteins in cotton aphids host adaptation

in Functional and Applied Plant Genomics

Hui Xue
Mengjie Yan
Xiangzhen Zhu
Li Wang
Lizhen Chen
Junyu Luo
Jinjie Cui
Xueke Gao

Frontiers in Plant Science

doi 10.3389/fpls.2024.1500834

1,978 views
1 citation

Original Research

Published on 28 Nov 2024

Elemental profiling and genome-wide association studies reveal genomic variants modulating ionomic composition in Populus trichocarpa leaves

in Functional and Applied Plant Genomics

Raphael Ployet
Kai Feng
Jin Zhang
Ivan Baxter
David C. Glasgow
Hunter B. Andrews
Miguel Rodriguez
Jin-Gui Chen
Gerald A. Tuskan
Timothy J. Tschaplinski

Frontiers in Plant Science

doi 10.3389/fpls.2024.1450646

2,689 views

Original Research

Published on 20 Nov 2024

Metabolomic and transcriptomic analyses jointly reveal the mechanism underlying the reddening of Chimonanthus praecox stamens

in Functional and Applied Plant Genomics

Bin Liu
Huafeng Wu
Yinzhu Cao
Guanpeng Ma
Xiaowen Zheng
Haoxiang Zhu
Xingrong Song
Shunzhao Sui

Frontiers in Plant Science

doi 10.3389/fpls.2024.1491246

1,617 views
2 citations

Original Research

Published on 20 Nov 2024

Genome expression analysis of basic helix-loop-helix transcription factors in Sea buckthorn (Hippophae rhamnoides L.)

in Functional and Applied Plant Genomics

Jiajia Zhang
Gaigai Du
Guoyun Zhang
Jianguo Zhang
Songfeng Diao

Frontiers in Plant Science

doi 10.3389/fpls.2024.1487960

1,464 views

Original Research

Published on 18 Nov 2024

Genome-wide association analysis and genomic prediction of salt tolerance trait in soybean germplasm

in Functional and Applied Plant Genomics

Rongqing Xu
Qing Yang
Zhi Liu
Xiaolei Shi
Xintong Wu
Yuehan Chen
Xinyu Du
Qiqi Gao
Di He
Ainong Shi

Frontiers in Plant Science

doi 10.3389/fpls.2024.1494551

2,965 views
7 citations

Original Research

Published on 14 Nov 2024

Identification of QTL-allele systems of seed size and oil content for simultaneous genomic improvement in Northeast China soybeans

in Functional and Applied Plant Genomics

Jianbo He
Lianshun Fu
Xiaoshuai Hao
Yicun Wu
Mengfan Wang
Qi Zhang
Weidan Feng
Mengmeng Fu
Yanping Wang
Haixiang Ren

Frontiers in Plant Science

doi 10.3389/fpls.2024.1483995

1,717 views

Original Research

Published on 14 Nov 2024

Resveratrol enhances the tolerance of Malus hupehensis to potassium deficiency stress

in Functional and Applied Plant Genomics

Zhijuan Sun
Tianchao Wang
Jianyu Li
Xiaodong Zheng
Hongjuan Ge
Guangli Sha
Changqing Ma
Qiang Zhao
Caihong Wang
Yike Tian

Frontiers in Plant Science

doi 10.3389/fpls.2024.1503463

1,362 views
2 citations

Methods

Published on 13 Nov 2024

Screening method and metabolic analysis of plant anti-aging microorganisms via ammonia-induced senescence in the duckweed Wolffia microscopica

in Functional and Applied Plant Genomics

Deguan Tan
Lili Fu
Ying Yu
Xuepiao Sun
Jiaming Zhang

Frontiers in Plant Science

doi 10.3389/fpls.2024.1480588

2,652 views
1 citation

Original Research

Published on 13 Nov 2024

Pan-genome wide identification and analysis of the SAMS gene family in sunflowers (Helianthus annuus L.) revealed their intraspecies diversity and potential roles in abiotic stress tolerance

in Functional and Applied Plant Genomics

Chun Zhang
Haoyu Li
Jiamin Yin
Zhibin Han
Xinqi Liu
Yang Chen

Frontiers in Plant Science

doi 10.3389/fpls.2024.1499024

2,587 views
2 citations

Data Report

Published on 11 Nov 2024

Chromosome-level assembly of the Clinopodium gracile genome

in Functional and Applied Plant Genomics

Yubang Gao

Frontiers in Plant Science

doi 10.3389/fpls.2024.1489102

1,556 views

Original Research

Published on 07 Nov 2024

The maize gene ZmSBP17 encoding an SBP transcription factor confers osmotic resistance in transgenic Arabidopsis

in Functional and Applied Plant Genomics

Lifang Sun
Lijiao Wang
Jinping Niu
Wei Yang
Zhifang Li
Libin Liu
Shuren Gao

Frontiers in Plant Science

doi 10.3389/fpls.2024.1483486

2,105 views
3 citations

Original Research

Published on 30 Oct 2024

Genome-wide association studies of bundle and single fiber length traits reveal the genetic basis of within-sample variation in upland cotton fiber length

in Functional and Applied Plant Genomics

Hee Jin Kim
Gregory N. Thyssen
Christopher D. Delhom
David D. Fang
Marina Naoumkina
Christopher B. Florane
Ping Li
Johnie N. Jenkins
Jack C. McCarty
Linghe Zeng

Frontiers in Plant Science

doi 10.3389/fpls.2024.1472675

2,487 views
4 citations

Original Research

Published on 25 Oct 2024

Comprehensive analysis of transcription factor binding sites and expression profiling of rice pathogenesis related genes (OsPR1)

in Functional and Applied Plant Genomics

Diksha Kumari
Bishun Deo Prasad
Padmanabh Dwivedi
Sangita Sahni
Mankesh Kumar
Saud Alamri
Muhammad Faheem Adil
Khaled A. Alakeel

Frontiers in Plant Science

doi 10.3389/fpls.2024.1463147

3,374 views
5 citations

Original Research

Published on 18 Oct 2024

Discovery of genes that positively affect biomass and stress associated traits in poplar

in Functional and Applied Plant Genomics

Tatyana Georgieva
Yordan Yordanov
Elena Yordanova
Md Rezaul Islam Khan
Kaiwen Lyu
Victor Busov

Frontiers in Plant Science

doi 10.3389/fpls.2024.1468905

1,546 views

Original Research

Published on 17 Oct 2024

Integratedly analyzed quantitative proteomics with transcriptomics to discover key genes via fg-1 non-heading mutant in the early heading stage of Chinese cabbage

in Functional and Applied Plant Genomics

Jingrui Li
Mi Fan
Xiaomeng Zhang
Liling Yang
Guangguang Hou
Lei Yang
Na Li
Shuxin Xuan
Jianjun Zhao

Frontiers in Plant Science

doi 10.3389/fpls.2024.1467006

1,777 views

623 articles

articles

Identification and analysis of major latex protein (MLP) family genes in Rosa chinensis responsive to Botrytis cinerea infection by RNA-seq approaches

Editorial: Crop abiotic stress: advances in germplasm/gene discovery and utilization

Characterization of the complete chloroplast genome of the endangered and endemic bornean fruit Artocarpus tamaran Becc

Understanding the defense mechanism of Allium plants through the onion isoallicin-omics study

Editorial: Wheat disease resistance: diagnosis, germplasm mining, and molecular breeding

Evaluation of stripe rust resistance and analysis of resistance genes in wheat genotypes from Pakistan and Southwest China

Editorial: Research advances on forest tree functional genomics and breeding

Cuticular wax in wheat: biosynthesis, genetics, and the stress response

Genome-wide identification and expression analysis of the AS2/LOB gene family in physic nut

AgoArmet and AgoC002: key effector proteins in cotton aphids host adaptation

Elemental profiling and genome-wide association studies reveal genomic variants modulating ionomic composition in Populus trichocarpa leaves

Metabolomic and transcriptomic analyses jointly reveal the mechanism underlying the reddening of Chimonanthus praecox stamens

Genome expression analysis of basic helix-loop-helix transcription factors in Sea buckthorn (Hippophae rhamnoides L.)

Genome-wide association analysis and genomic prediction of salt tolerance trait in soybean germplasm

Identification of QTL-allele systems of seed size and oil content for simultaneous genomic improvement in Northeast China soybeans

Resveratrol enhances the tolerance of Malus hupehensis to potassium deficiency stress

Screening method and metabolic analysis of plant anti-aging microorganisms via ammonia-induced senescence in the duckweed Wolffia microscopica

Pan-genome wide identification and analysis of the SAMS gene family in sunflowers (Helianthus annuus L.) revealed their intraspecies diversity and potential roles in abiotic stress tolerance

Chromosome-level assembly of the Clinopodium gracile genome

The maize gene ZmSBP17 encoding an SBP transcription factor confers osmotic resistance in transgenic Arabidopsis

Genome-wide association studies of bundle and single fiber length traits reveal the genetic basis of within-sample variation in upland cotton fiber length

Comprehensive analysis of transcription factor binding sites and expression profiling of rice pathogenesis related genes (OsPR1)

Discovery of genes that positively affect biomass and stress associated traits in poplar

Integratedly analyzed quantitative proteomics with transcriptomics to discover key genes via fg-1 non-heading mutant in the early heading stage of Chinese cabbage